Pre_GI Gene

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Host: NC_006512 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006512:952894 Idiomarina loihiensis L2TR, complete genome

Host Lineage: Idiomarina loihiensis; Idiomarina; Idiomarinaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This is the type strain for this organism, which was isolated from a hydrothermal vent at a depth of 1300 m from the Lo'ihi Seamount southeast of Hawaii. This organism grows optimally in salt concentrations of 7.5 to 10%. Genome comparison has suggested that the bacterium has maintained its amino acid transport and degradation systems but lost sugar transport and certain sugar metabolic genes suggesting that it lives on amino acids rather than sugars. This may be in keeping with the environment this organism grows in, which is at hydrothermal deep sea vents that are characterized by collections of proteinaceous particles. This organism may colonize these particles by producing exopolysaccharides.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
952894953457564hypothetical proteinBLASTP
953461953943483Phosphohistidine phosphatase SixAQuickGO ontologyBLASTP
953940954317378hypothetical proteinBLASTP
954295954741447Oligoketide cyclaselipid transport protein putativeQuickGO ontologyBLASTP
954848955327480SsrA-binding proteinQuickGO ontologyBLASTP
955269955781513Uncharacterized conserved secreted protein containing TPR repeatsQuickGO ontology
955735956127393hypothetical proteinBLASTP
956124956837714Flp pilus assembly protein TadCQuickGO ontologyBLASTP
956909957610702Flp pilus assembly protein TadBQuickGO ontologyBLASTP
9577429589651224possible Flp pilus assembly protein CpaFQuickGO ontologyBLASTP
9589629601761215possible Flp pilus assembly protein CpaCQuickGO ontologyBLASTP
960161960868708Flp pilus assembly protein CpaBQuickGO ontologyBLASTP
961053961559507Hypothetical protein IL_1 familyQuickGO ontologyBLASTP
961667962167501Hypothetical protein IL_1 familyQuickGO ontologyBLASTP
962170962667498hypothetical protein
9626969639191224Uncharacterized secreted proteinQuickGO ontology
963916964194279FlpFap pilin homologQuickGO ontology
964349964648300RelEParE family proteinQuickGO ontologyBLASTP
964645964884240hypothetical protein
965040965741702Organic radical activating enzymeQuickGO ontologyBLASTP
965774966430657Predicted PP-loop superfamily ATPaseQuickGO ontologyBLASTP
966446967438993beta-hexosaminidaseQuickGO ontologyBLASTP
9675729689151344Carboxyl-terminal proteaseQuickGO ontologyBLASTP
9689479712862340Acyl-CoA dehydrogenase family proteinQuickGO ontologyBLASTP
971350971976627Transcriptional regulator TetR familyQuickGO ontologyBLASTP