Pre_GI Gene

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Host: NC_007912 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007912:3466966 Saccharophagus degradans 2-40, complete genome

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
34669663467373408Helix-turn-helix AraC typeQuickGO ontologyBLASTP
34674543467849396Small protein A tmRNA-binding-likeQuickGO ontologyBLASTP
34679463468272327hypothetical proteinBLASTP
34683203468751432hypothetical proteinBLASTP
346875534701281374sodium-dependent transporter family proteinQuickGO ontologyBLASTP
34703043470792489ssrA-binding protein Small protein BQuickGO ontologyBLASTP
34709103471362453hypothetical proteinBLASTP
347223734734901254phage integraseQuickGO ontologyBLASTP
34734803474088609hypothetical protein
34741913474469279putative transcriptional regulatorQuickGO ontologyBLASTP
34744863475280795hypothetical protein
347564334768151173hypothetical proteinBLASTP
347680834790842277hypothetical proteinBLASTP
34798753480465591hypothetical proteinBLASTP
34814483481774327hypothetical proteinBLASTP
34817743482049276ATPaseQuickGO ontologyBLASTP
348257934846272049putative ATP-dependent Lon proteaseQuickGO ontologyBLASTP