Pre_GI Gene

Some Help

Host: NC_009457 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009457:351512 Vibrio cholerae O395 chromosome 2, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3515123531281617hypothetical proteinBLASTP
353196353879684hypothetical proteinBLASTP
3540123557811770hypothetical proteinBLASTP
355973356488516hypothetical proteinBLASTP
356822357526705hypothetical proteinBLASTP
3575963605352940DEADDEAH box helicaseQuickGO ontologyBLASTP
360536361114579tellurite resistance protein-like proteinQuickGO ontologyBLASTP
361542362021480transcriptional regulatorQuickGO ontologyBLASTP
3620063633761371hypothetical proteinBLASTP
363965364948984transposaseQuickGO ontologyBLASTP
364974365114141transposaseQuickGO ontologyBLASTP
365436365654219transposaseQuickGO ontologyBLASTP
3659963676211626aldehyde dehydrogenaseQuickGO ontologyBLASTP
3676973707383042ToxR-activated gene A proteinQuickGO ontologyBLASTP
3708513725601710hypothetical proteinBLASTP
3725633754512889inner membrane proteinQuickGO ontologyBLASTP
375448376386939hypothetical proteinBLASTP
376496376990495thiol peroxidaseQuickGO ontologyBLASTP
3772823791441863toxin co-regulated pilus biosynthesis protein IQuickGO ontologyBLASTP
379581380246666toxin co-regulated pilus biosynthesis protein PQuickGO ontologyBLASTP
380231380641411toxin co-regulated pilus biosynthesis protein HQuickGO ontologyBLASTP
381188381862675toxin co-regulated pilinQuickGO ontologyBLASTP
3819433832351293toxin co-regulated pilus biosynthesis protein BQuickGO ontologyBLASTP
383235383687453toxin co-regulated pilus biosynthesis protein QQuickGO ontologyBLASTP
3836903851591470toxin co-regulated pilus biosynthesis outer membrane protein CQuickGO ontologyBLASTP
385152385607456toxin co-regulated pilus biosynthesis protein RQuickGO ontologyBLASTP
385595386431837toxin co-regulated pilus biosynthesis protein DQuickGO ontologyBLASTP
386447386905459toxin co-regulated pilus biosynthesis protein SQuickGO ontologyBLASTP
3868953884061512toxin co-regulated pilus biosynthesis protein TQuickGO ontologyBLASTP
3883813894031023toxin co-regulated pilus biosynthesis protein EQuickGO ontologyBLASTP
3894133904291017toxin co-regulated pilus biosynthesis protein FQuickGO ontologyBLASTP
390636391466831TCP pilus virulence regulatory proteinQuickGO ontologyBLASTP
391466392227762leader peptidase TcpJQuickGO ontologyBLASTP
3922343941141881accessory colonization factor AcfBQuickGO ontologyBLASTP
394120394890771accessory colonization factor AcfCQuickGO ontologyBLASTP
395388396296909tagE proteinQuickGO ontologyBLASTP
396299396946648accessory colonization factor AcfAQuickGO ontologyBLASTP
397197397385189accessory colonization factor AcfDQuickGO ontologyBLASTP
3973514016824332lipoproteinQuickGO ontologyBLASTP
402719402877159phage family integraseQuickGO ontologyBLASTP
4035974048651269phage family integraseQuickGO ontologyBLASTP
405467405952486SsrA-binding proteinQuickGO ontologyBLASTP
406130406570441hypothetical proteinBLASTP
406567406878312hypothetical proteinBLASTP
406956407366411small protein AQuickGO ontologyBLASTP
4074744091381665recombination and repair proteinQuickGO ontologyBLASTP
409268410152885inorganic polyphosphateATP-NAD kinaseQuickGO ontologyBLASTP
410298410900603heat shock protein GrpEQuickGO ontologyBLASTP
410893411006114hypothetical protein
4111644130711908molecular chaperone DnaKQuickGO ontologyBLASTP