Pre_GI: BLASTP Hits

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Query: NC_008825:404000:406059 Methylibium petroleiphilum PM1, complete genome

Start: 406059, End: 406916, Length: 858

Host Lineage: Methylibium petroleiphilum; Methylibium; ; Burkholderiales; Proteobacteria; Bacteria

General Information: Methylibium petroleiphilum strain PM1 (ATCC BAA-1232) was isolated in 1998 from the biofilter of a treatment plant in an oil refinery in Los Angeles, California, USA. Strain PM1 is capable of degrading aromatic compounds such as benzene, toluene and xylenes. Methyl tertiary-butyl ether-degrading bacterium. Methylibium petroleiphilum is a methylotroph (able to utilize reduced one-carbon compounds) able to degrade methyl tertiary-butyl ether (MTBE) under aerobic conditions. MTBE is a gasoline additive used as an oxygenate and to raise the octane number.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010002:4287439:431379643137964314698903Delftia acidovorans SPH-1, complete genometranscriptional regulator, LysR family7e-39160
NC_012660:4669500:468873846887384689601864Pseudomonas fluorescens SBW25 chromosome, complete genomeputative LysR family transcriptional regulator2e-36153
NC_009439:2337024:235478523547852355639855Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator5e-36151
NC_015410:2838132:284148928414892842343855Pseudomonas mendocina NK-01 chromosome, complete genomeLysR family transcriptional regulator1e-35150
NC_003295:659837:662013662013662882870Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN2e-34146
NC_020063:3690308:373302537330253733897873Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator4e-33141
NC_016622:82418:103229103229104170942Azospirillum lipoferum 4B, complete genomeLysR family transcriptional regulator5e-31135
NC_007519:64157:803788037881283906Desulfovibrio alaskensis G20 chromosome, complete genomeLysR family transcriptional regulator4e-31135
NC_011757:4445343:444986244498624450743882Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, LysR family2e-30132
NC_010159:1861465:188310218831021884031930Yersinia pestis Angola, complete genometranscriptional regulator LrhA5e-28125
NC_015224:3191000:320949632094963210428933Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,LysR family transcriptional regulator3e-28125
NC_003143:2849377:287102128710212871953933Yersinia pestis CO92, complete genomeLysR-family transcriptional regulatory protein3e-28125
NC_006155:3040769:306248730624873063419933Yersinia pseudotuberculosis IP 32953, complete genomeLysR-family transcriptional regulatory protein3e-28125
NC_008149:2411161:243283524328352433767933Yersinia pestis Nepal516, complete genomeLysR-family transcriptional regulatory protein3e-28125
NC_017265:1521276:152127615212761522208933Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,LysR-family transcriptional regulatory protein3e-28125
NC_010725:750911:772714772714773592879Methylobacterium populi BJ001, complete genometranscriptional regulator, LysR family1e-27123
NC_015379:4282815:428503442850344285888855Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family3e-27122
NC_012811:1105395:112754111275411128443903Methylobacterium extorquens AM1 megaplasmid, complete sequenceTranscriptional regulator, LysR family7e-27121
NC_014640:6971000:697104369710436971975933Achromobacter xylosoxidans A8 chromosome, complete genometranscriptional regulator7e-27121
NC_005810:2613456:263510026351002636044945Yersinia pestis biovar Microtus str. 91001, complete genomeLysR family transcriptional regulator2e-26120
NC_007963:2644930:267232126723212673205885Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, LysR family2e-26120
NC_010634:2960000:298038629803862981348963Yersinia pseudotuberculosis PB1/+, complete genomeLysR family transcriptional regulator8e-26117
NC_020829:2022000:202767020276702028554885Pseudomonas denitrificans ATCC 13867, complete genometranscriptional regulator1e-25116
NC_006350:1084930:108493010849301085826897Burkholderia pseudomallei K96243 chromosome 1, complete sequenceLysR family transcriptional regulator1e-25116
NC_010581:561579:580129580129581079951Beijerinckia indica subsp. indica ATCC 9039, complete genometranscriptional regulator, LysR family2e-25116
NC_008095:2031997:204256720425672043448882Myxococcus xanthus DK 1622, complete genometranscriptional regulator, LysR family4e-25115
NC_010725:1419272:143411314341131435012900Methylobacterium populi BJ001, complete genometranscriptional regulator, LysR family3e-25115
NC_012779:2064582:2070273207027320712741002Edwardsiella ictaluri 93-146, complete genomeHTH-type transcriptional regulator PecT9e-25114
NC_006512:2211654:223007222300722230914843Idiomarina loihiensis L2TR, complete genomeTranscriptional regulator, LysR family2e-24112
NC_014618:2139639:215062821506282151503876Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator3e-24112
NC_012214:1438476:145355614535561454485930Erwinia pyrifoliae Ep1/96, complete genomeLysR-family transcriptional regulator6e-24111
NC_009667:1341000:135994713599471360798852Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceLysR family transcriptional regulator6e-24111
NC_013592:2968500:299491129949112995762852Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family1e-23110
NC_013971:2478676:248239124823912483320930Erwinia amylovora ATCC 49946 chromosome, complete genomeNADH dehydrogenase operon transcriptional regulator2e-23110
NC_013961:2441148:244486324448632445792930Erwinia amylovora, complete genomeprobable HTH-type transcriptional regulator lrhA2e-23110
NC_010694:1324250:133909913390991340025927Erwinia tasmaniensis, complete genomeLysR-family transcriptional regulator2e-23109
NC_015422:1:130181301813860843Alicycliphilus denitrificans K601 chromosome, complete genomeLysR family transcriptional regulator4e-23108
NC_010694:891967:895780895780896682903Erwinia tasmaniensis, complete genomePutative transcriptional regulator protein, LysR family8e-23107
NC_015424:2836920:283692028369202837774855Aeromonas veronii B565 chromosome, complete genomeLysR family transcriptional regulator6e-22104
NC_013592:3397304:341194634119463412842897Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family1e-21103
NC_010508:2776283:280057828005782801465888Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, LysR family1e-21103
NC_006087:1334500:133839513383951339249855Leifsonia xyli subsp. xyli str. CTCB07, complete genometranscriptional regulator, LysR family2e-21102
NC_010554:1871000:188943718894371890354918Proteus mirabilis HI4320, complete genomeLysR-family transcriptional regulator3e-21102
NC_014838:175939:194068194068194949882Pantoea sp. At-9b plasmid pPAT9B01, complete sequencetranscriptional regulator, LysR family9e-21100
NC_007511:719493:736224736224737078855Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family2e-20100
NC_008061:428501:445939445939446790852Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, LysR family2e-1996.3
NC_010515:2358134:237710923771092377960852Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, LysR family3e-1995.5
NC_008321:2569315:257290825729082573792885Shewanella sp. MR-4, complete genometranscriptional regulator, LysR family4e-1995.5
NC_008322:2637646:264124826412482642132885Shewanella sp. MR-7, complete genometranscriptional regulator, LysR family4e-1995.5
NC_015379:4282815:428725542872554288142888Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family1e-1893.6
NC_009654:91096:959369593696802867Marinomonas sp. MWYL1, complete genomeLysR family transcriptional regulator4e-1685.5
NC_020209:945000:960556960556961392837Pseudomonas poae RE*1-1-14, complete genomeLysR family transcriptional regulator4e-1685.5
NC_015723:384000:384000384000384887888Cupriavidus necator N-1 chromosome 2, complete sequenceLysR family transcriptional regulator1e-1583.6
NC_015567:69190:718287182872682855Serratia sp. AS9 chromosome, complete genomeLysR family transcriptional regulator2e-1583.2
NC_015566:69190:718287182872682855Serratia sp. AS12 chromosome, complete genomeLysR family transcriptional regulator2e-1583.2
NC_009832:110239:112502112502113356855Serratia proteamaculans 568, complete genometranscriptional regulator, LysR family3e-1582.4
NC_007005:2191500:220082522008252201748924Pseudomonas syringae pv. syringae B728a, complete genomeregulatory protein, LysR:LysR, substrate-binding1e-1377.4
NC_007511:2072838:209585220958522096709858Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family2e-1376.6
NC_013947:3406000:342305334230533423895843Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, LysR family7e-1271.2
NC_015381:1318818:133827613382761339097822Burkholderia gladioli BSR3 chromosome 1, complete sequenceLysR family transcriptional regulator2e-1169.7
NC_014828:1632000:164093116409311641830900Ethanoligenens harbinense YUAN-3 chromosome, complete genometranscriptional regulator, LysR family8e-1167.8
NC_014153:2187409:218740921874092188347939Thiomonas intermedia K12 chromosome, complete genometranscriptional regulator, LysR family2e-1067
NC_009512:1518113:155322815532281554121894Pseudomonas putida F1, complete genometranscriptional regulator, LysR family3e-1066.2
NC_016830:2642881:265919626591962660062867Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator4e-1065.9
NC_004129:1741816:176837617683761769269894Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LysR family4e-1065.5
NC_015379:4249238:425623242562324257098867Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family8e-1064.7
NC_015563:313283:314588314588315505918Delftia sp. Cs1-4 chromosome, complete genomeLysR family transcriptional regulator2e-0963.2
NC_016830:1719407:174279817427981743691894Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator5e-0962
NC_007948:517893:518352518352519215864Polaromonas sp. JS666, complete genometranscriptional regulator, LysR family7e-0961.6
NC_003063:1128370:114948611494861150337852Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein5e-0961.6
NC_003305:922357:924419924419925270852Agrobacterium tumefaciens str. C58 chromosome linear, completetranscriptional regulator, LysR family5e-0961.6
NC_020209:945000:954754954754955623870Pseudomonas poae RE*1-1-14, complete genomeLysR family transcriptional regulator8e-0961.2
NC_014840:205723:242622242622243512891Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, LysR family1e-0860.8
NC_013850:2846069:285660128566012857494894Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, LysR family1e-0860.8
NC_011662:131956:148443148443149357915Thauera sp. MZ1T, complete genometranscriptional regulator, LysR family2e-0860.1
NC_011283:2836000:286666428666642867557894Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator2e-0860.1
NC_011283:2836000:284973628497362850629894Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator2e-0860.1
NC_010002:2933909:294678329467832947643861Delftia acidovorans SPH-1, complete genometranscriptional regulator, LysR family3e-0859.3
NC_008825:1113060:111928911192891120185897Methylibium petroleiphilum PM1, complete genometranscriptional regulator, LysR family3e-0859.3
NC_016830:3697173:370151137015113702395885Pseudomonas fluorescens F113 chromosome, complete genomeRegulatory protein, LysR:LysR, substrate-binding protein3e-0859.3
NC_011126:1241655:126042712604271261350924Hydrogenobaculum sp. Y04AAS1, complete genometranscriptional regulator, LysR family4e-0858.9
NC_017190:2002718:200271820027182003635918Bacillus amyloliquefaciens LL3 chromosome, complete genomeLysR family transcriptional regulator4e-0858.9
NC_015727:1076927:108784310878431088742900Cupriavidus necator N-1 plasmid BB1p, complete sequenceLysR family transcriptional regulator4e-0858.9
NC_020411:1232962:125176712517671252690924Hydrogenobaculum sp. HO, complete genometranscriptional regulator, LysR family5e-0858.5
NC_015587:1232642:125144212514421252365924Hydrogenobaculum sp. SHO chromosome, complete genometranscriptional regulator, LysR family5e-0858.5
NC_015557:1232772:125157212515721252495924Hydrogenobaculum sp. 3684 chromosome, complete genometranscriptional regulator, LysR family5e-0858.5
NC_014551:2057971:205797120579712058873903Bacillus amyloliquefaciens DSM 7, complete genometranscriptional regulator (LysR family)5e-0858.5
NC_015379:3175500:318110231811023181986885Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family5e-0858.5
NC_004113:1234048:1250682125068212517221041Thermosynechococcus elongatus BP-1, complete genomeLysR family transcriptional regulator5e-0858.5
NC_002516:776787:781259781259782113855Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator6e-0858.2
NC_013406:1145268:114526811452681146170903Paenibacillus sp. Y412MC10 chromosome, complete genomeLysR family transcriptional regulator9e-0857.8
NC_005042:165530:168990168990169943954Prochlorococcus marinus subsp. marinus str. CCMP1375, completeRuBisCO operon transcriptional regulator8e-0857.8
NC_016902:2361628:237748123774812378362882Escherichia coli KO11FL chromosome, complete genomeLysR family transcriptional regulator1e-0757
CP002516:2361628:237748123774812378362882Escherichia coli KO11, complete genometranscriptional regulator, LysR family1e-0757
CP002185:1727493:172749317274931728374882Escherichia coli W, complete genomepredicted DNA-binding transcriptional regulator1e-0757
NC_011892:306437:311139311139312089951Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completetranscriptional regulator, LysR family1e-0757
NC_020410:2509057:252344325234432524342900Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative transcriptional regulator (LysR family)2e-0756.6
NC_011415:1715644:171564417156441716525882Escherichia coli SE11 chromosome, complete genomeputative transcriptional regulator2e-0756.6
NC_010515:1491590:151296815129681513852885Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, LysR family2e-0756.2
NC_010498:1615980:163344816334481634329882Escherichia coli SMS-3-5, complete genomeLysR family transcriptional regulator3e-0755.8
NC_011741:1625535:162553516255351626416882Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator4e-0755.5
CU928160:1625535:162553516255351626416882Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator4e-0755.5
NC_012560:4201969:421861342186134219548936Azotobacter vinelandii DJ, complete genomeBacterial regulatory protein, LysR family4e-0755.5
NC_021150:4201965:421860942186094219544936Azotobacter vinelandii CA6, complete genomeLysR family regulatory protein4e-0755.5
NC_009832:1664238:167195616719561672858903Serratia proteamaculans 568, complete genometranscriptional regulator, LysR family6e-0755.1
NC_007335:1474455:147796814779681478918951Prochlorococcus marinus str. NATL2A, complete genomeRuBisCO operon transcriptional regulator5e-0755.1
NC_008819:199760:203273203273204223951Prochlorococcus marinus str. NATL1A, complete genomeputative Rubisco transcriptional regulator5e-0755.1
NC_004088:2937077:294043129404312941300870Yersinia pestis KIM, complete genometranscriptional regulator LYSR-type7e-0754.7
NC_008149:2773139:277649327764932777362870Yersinia pestis Nepal516, complete genomeLysR-family transcriptional regulatory protein7e-0754.7
NC_010159:3169266:318233131823313183200870Yersinia pestis Angola, complete genomesubstrate-binding transcriptional regulator, LysR family7e-0754.7
NC_008150:905000:920198920198921067870Yersinia pestis Antiqua, complete genomeputative LysR-family transcriptional regulatory protein7e-0754.7
NC_003143:1691000:170633417063341707203870Yersinia pestis CO92, complete genomeputative LysR-family transcriptional regulatory protein7e-0754.7
NC_005810:1520000:153523815352381536107870Yersinia pestis biovar Microtus str. 91001, complete genomeLysR family transcriptional regulator7e-0754.7
NC_008563:1651270:165374916537491654630882Escherichia coli APEC O1, complete genomealdehyde-dehydrogenase like protein YneI8e-0754.7
NC_009481:2081500:2099147209914721001601014Synechococcus sp. WH 7803 chromosome, complete genomeRuBisCO operon transcriptional regulator8e-0754.7
NC_006155:1807902:182435218243521825221870Yersinia pseudotuberculosis IP 32953, complete genomeputative LysR-family transcriptional regulatory protein7e-0754.7
NC_010634:1809500:182456118245611825430870Yersinia pseudotuberculosis PB1/+, complete genomeLysR family transcriptional regulator7e-0754.7
NC_010465:2820500:282265928226592823528870Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, LysR family7e-0754.7
NC_009381:1655731:165908516590851659954870Yersinia pestis Pestoides F chromosome, complete genomeLysR family transcriptional regulator7e-0754.7
NC_009708:2788855:279220927922092793078870Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeLysR family transcriptional regulator7e-0754.7
NC_014029:1760948:178083917808391781708870Yersinia pestis Z176003 chromosome, complete genomeputative LysR-family transcriptional regulatory protein7e-0754.7
NC_017154:1707500:172293217229321723801870Yersinia pestis D106004 chromosome, complete genomeputative LysR-family transcriptional regulatory protein7e-0754.7
NC_017160:2054289:205764320576432058512870Yersinia pestis D182038 chromosome, complete genomeputative LysR-family transcriptional regulatory protein7e-0754.7
NC_017168:3948514:395186839518683952737870Yersinia pestis A1122 chromosome, complete genomeputative LysR-family transcriptional regulatory protein7e-0754.7
NC_017265:2557476:256083025608302561699870Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative LysR-family transcriptional regulatory protein7e-0754.7
NC_014541:2325780:232659623265962327501906Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator6e-0754.7
NC_008800:3061484:306483130648313065700870Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,LysR family transcriptional regulator9e-0754.3
NC_014838:254322:267611267611268552942Pantoea sp. At-9b plasmid pPAT9B01, complete sequencetranscriptional regulator, LysR family1e-0653.9
NC_016048:3856665:386821238682123869141930Oscillibacter valericigenes Sjm18-20, complete genomeputative LysR family transcriptional regulator1e-0653.9
NC_009778:1717458:175198417519841752856873Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-0653.5
NC_009512:1518113:152138515213851522308924Pseudomonas putida F1, complete genometranscriptional regulator, LysR family2e-0653.5
NC_003295:199354:236487236487237353867Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN2e-0653.1
NC_014618:2423661:242366124236612424572912Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator2e-0653.1
NC_012108:481657:491391491391491639249Desulfobacterium autotrophicum HRM2, complete genomeputative transcriptional regulator2e-0653.1
NC_016641:4290350:429276142927614293657897Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator ywqm2e-0653.1
NC_014540:2828299:285090728509072851857951Burkholderia sp. CCGE1003 chromosome 2, complete sequenceLysR family transcriptional regulator3e-0652.8
NC_015224:1703130:171942717194271720296870Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,LysR family transcriptional regulator2e-0652.8
NC_007510:1959883:200160520016052002543939Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, LysR family4e-0652.4
NC_016641:2773757:279559727955972796481885Paenibacillus terrae HPL-003 chromosome, complete genomeLysR family transcriptional regulator5e-0652
NC_012881:3520956:354014435401443541031888Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, LysR family5e-0652
NC_013411:2236166:225897722589772259885909Geobacillus sp. Y412MC61, complete genometranscriptional regulator, LysR family6e-0651.6
NC_014915:1376035:139892113989211399829909Geobacillus sp. Y412MC52 chromosome, complete genometranscriptional regulator, LysR family6e-0651.6
NC_007973:3240866:325367732536773254501825Ralstonia metallidurans CH34 chromosome 1, complete sequencetranscriptional regulator, LysR family6e-0651.6
NC_009792:1479779:149990114999011500767867Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-0651.6
NC_006510:1446490:146725614672561468167912Geobacillus kaustophilus HTA426, complete genometranscription activator of glutamate synthase(LysR family)5e-0651.6
NC_007005:1636875:1667185166718516682281044Pseudomonas syringae pv. syringae B728a, complete genomeregulatory protein, LysR:LysR, substrate-binding9e-0651.2
NC_014650:2417509:242372524237252424627903Geobacillus sp. Y4.1MC1 chromosome, complete genomeLysR family transcriptional regulator8e-0651.2
NC_010086:1816378:188389218838921884815924Burkholderia multivorans ATCC 17616 chromosome 2, completetranscriptional regulator, LysR family8e-0651.2
NC_011901:342777:345910345910346800891Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeMetR family transcriptional regulator8e-0651.2
NC_010805:575709:590489590489591412924Burkholderia multivorans ATCC 17616 chromosome 2, completeLysR family transcriptional regulator8e-0651.2
NC_009255:1105786:114008611400861141009924Burkholderia vietnamiensis G4 chromosome 2, complete sequenceLysR family transcriptional regulator8e-0651.2
NC_012214:1650523:167265416726541673631978Erwinia pyrifoliae Ep1/96, complete genomeNitrogen assimilation regulatory protein7e-0651.2
NC_016582:175589:184997184997185902906Streptomyces bingchenggensis BCW-1 chromosome, complete genomeLysR family transcriptional regulator7e-0651.2
NC_007948:4558000:460970146097014610603903Polaromonas sp. JS666, complete genometranscriptional regulator, LysR family1e-0550.8