Pre_GI Gene

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Host: NC_009708 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009708:2788855 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
278885527900211167hypothetical proteinBLASTP
27900762790738663GTP cyclohydrolase IQuickGO ontologyBLASTP
279092227920731152major facilitator transporterQuickGO ontologyBLASTP
27922092793078870LysR family transcriptional regulatorQuickGO ontologyBLASTP
279335427944931140S-hydroxymethylglutathione dehydrogenaseclass III alcohol dehydrogenaseQuickGO ontologyBLASTP
27945142795356843S-formylglutathione hydrolaseQuickGO ontologyBLASTP
27954342795586153hypothetical proteinBLASTP
279590927982692361hypothetical proteinBLASTP
279827127995331263RND family efflux transporter MFP subunitQuickGO ontologyBLASTP
27995352800203669ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
280021328015231311radical SAM domain-containing proteinQuickGO ontologyBLASTP
280205828033321275molybdopterin biosynthesis protein MoeAQuickGO ontologyBLASTP
28033342804104771molybdopterin biosynthesis protein MoeBQuickGO ontologyBLASTP
28041762804823648hypothetical proteinBLASTP
280504128066361596ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
28073192807942624hypothetical proteinBLASTP
280815428095211368ImpA domain-containing proteinQuickGO ontologyBLASTP
28095452809997453hypothetical proteinBLASTP
28099972810578582hypothetical proteinBLASTP
281055328116381086hypothetical proteinBLASTP
281160228133651764hypothetical proteinBLASTP
28134572813915459hypothetical proteinBLASTP
281391828150331116hypothetical proteinBLASTP
281505128166521602ImpA domain-containing proteinQuickGO ontologyBLASTP
28166972817518822hypothetical proteinBLASTP
281753128205723042hypothetical proteinBLASTP
282065428240763423hypothetical proteinBLASTP
282407328253051233hypothetical proteinBLASTP
28272512827418168hypothetical protein
28280172828238222hypothetical protein
282824528297381494M23 peptidase domain-containing proteinQuickGO ontologyBLASTP
28297542830014261hypothetical proteinBLASTP
28301682830941774hypothetical proteinBLASTP
283093828332382301M23 peptidase domain-containing proteinQuickGO ontologyBLASTP
283325428356022349Rhs element Vgr proteinQuickGO ontologyBLASTP
283560528382472643AAA ATPaseQuickGO ontologyBLASTP
28385412839032492hypothetical proteinBLASTP
283903628407721737OmpA domain-containing proteinQuickGO ontologyBLASTP
28407722841458687hypothetical proteinBLASTP
284145528428071353hypothetical proteinBLASTP
284281928443691551hypothetical proteinBLASTP
28444122844912501hypothetical proteinBLASTP
28459012846749849acyltransferaseQuickGO ontologyBLASTP
28468482847096249acyl carrier proteinQuickGO ontologyBLASTP
28471342847574441hypothetical proteinBLASTP
28476612848449789hypothetical proteinBLASTP
28484522849204753polyketide biosynthesis enoyl-CoA hydrataseQuickGO ontologyBLASTP
28492062849925720enoyl-CoA hydrataseisomerase family proteinQuickGO ontologyBLASTP
284991828511561239hydroxymethylglutaryl-coenzyme A synthaseQuickGO ontologyBLASTP
28511722851909738short-chain dehydrogenasereductase family proteinQuickGO ontologyBLASTP
285191128531941284beta-ketoacyl synthase family proteinQuickGO ontologyBLASTP
28531842853708525thioester dehydratase family proteinQuickGO ontologyBLASTP