Pre_GI Gene

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Host: NC_007005 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007005:2191500 Pseudomonas syringae pv. syringae B728a, complete genome

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
219155321926861134ATP-binding region ATPase-likeHistidine kinase A N-terminalQuickGO ontologyBLASTP
21927802193142363hypothetical protein
21931532193968816carboxyphosphonoenolpyruvate phosphonomutase-like proteinQuickGO ontologyBLASTP
219411221952211110Alphabeta hydrolase foldQuickGO ontologyBLASTP
21952372196166930UBATHIF-type NADFAD binding foldQuickGO ontologyBLASTP
219621021974331224hypothetical proteinBLASTP
21974082198067660hypothetical protein
219809721993771281diaminobutyrate--2-oxoglutarate aminotransferaseQuickGO ontologyBLASTP
21993772200087711unnamed protein product weakly similar to unknown proteinQuickGO ontology
22000952200541447unnamed protein product weakly similar to gentisate 12-dioxygenaseQuickGO ontologyBLASTP
22008252201748924regulatory protein LysRLysR substrate-bindingQuickGO ontologyBLASTP
220239022036791290hypothetical proteinBLASTP
22039552204692738hypothetical proteinBLASTP
22048912205214324hypothetical proteinBLASTP
22059282206392465hypothetical proteinBLASTP
22070572207692636hypothetical proteinBLASTP
22080622208556495Protein of unknown function DUF796QuickGO ontologyBLASTP
220905922100781020Dihydrouridine synthase TIM-barrel protein yjbNQuickGO ontologyBLASTP
22101902210621432UspAQuickGO ontologyBLASTP
22106222211086465Response regulator receiverQuickGO ontologyBLASTP
221108322134222340PASQuickGO ontologyBLASTP
22134192214087669regulatory protein LuxRResponse regulator receiverQuickGO ontologyBLASTP
221408422152681185ATP-binding region ATPase-likeHistidine kinaseQuickGO ontologyBLASTP
22154612215985525hypothetical proteinBLASTP
22160642216600537RNA polymerase sigma-70 factorQuickGO ontologyBLASTP
22169172217675759ThioesteraseQuickGO ontologyBLASTP
2217771223078113011peptide synthaseQuickGO ontologyBLASTP