Pre_GI Gene

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Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:1615980 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
161598016180252046peptidyl-dipeptidase DcpQuickGO ontologyBLASTP
16183881618780393hypothetical proteinBLASTP
16190351619925891diguanylate cyclaseQuickGO ontologyBLASTP
162036616215531188major facilitator family transporterQuickGO ontologyBLASTP
16217481622647900drugmetabolite exporter family transporterQuickGO ontologyBLASTP
16226921623390699GntR family transcriptional regulatorQuickGO ontologyBLASTP
16235891623900312PTS system lactosecellobiose family IIB subunitQuickGO ontologyBLASTP
162401416253361323PTS system lactosecellobiose family IIC subunitQuickGO ontologyBLASTP
16253641625675312PTS system lactosecellobiose-specific family IIA subunitQuickGO ontologyBLASTP
162573116274041674glucoside specific outer membrane porin BglHQuickGO ontologyBLASTP
162742916288681440putative 6-phospho-beta-glucosidase BglAQuickGO ontologyBLASTP
16289251629143219multiple antibiotic resistance protein MarBQuickGO ontologyBLASTP
16291751629558384multiple antibiotic resistance protein MarAQuickGO ontologyBLASTP
16295791630013435multiple antibiotic resistance protein MarRQuickGO ontologyBLASTP
16302251630890666multiple antibiotic resistance protein MarCQuickGO ontologyBLASTP
163091516321051191sugar efflux transporter SotBQuickGO ontologyBLASTP
16320231632145123hypothetical protein
16321821632301120hypothetical protein
163225516333701116hypothetical proteinBLASTP
16334481634329882LysR family transcriptional regulatorQuickGO ontologyBLASTP
163443016358181389aldehyde dehydrogenase NAD family proteinQuickGO ontologyBLASTP
16358821636808927glutaminaseQuickGO ontologyBLASTP
16368081637167360hypothetical proteinBLASTP