Pre_GI: BLASTP Hits

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Query: NC_004129:4333302:4346688 Pseudomonas fluorescens Pf-5, complete genome

Start: 4346688, End: 4347254, Length: 567

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013282:1842412:184311318431131843709597Cronobacter turicensis, complete genomehypothetical protein1e-44179
NC_020260:1293860:129386012938601294456597Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-44178
NC_010694:2716348:273066227306622731237576Erwinia tasmaniensis, complete genomePutative phage tail assembly protein1e-43175
NC_015062:58826:767697676977347579Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencelambda tail assembly I5e-43173
NC_009436:2395913:241346224134622414061600Enterobacter sp. 638, complete genomebacteriophage lambda tail assembly I7e-43173
NC_015566:3622385:363543036354303636038609Serratia sp. AS12 chromosome, complete genomelambda tail assembly I2e-42171
NC_016612:4119410:413284141328414133455615Klebsiella oxytoca KCTC 1686 chromosome, complete genomelambda tail assembly I4e-42170
NC_013892:3803278:380651538065153807090576Xenorhabdus bovienii SS-2004 chromosome, complete genomephage tail assembly protein6e-42170
NC_020418:2084937:210462021046202105258639Morganella morganii subsp. morganii KT, complete genomePhage tail assembly protein I1e-41168
NC_020418:2868000:289134528913452891983639Morganella morganii subsp. morganii KT, complete genomePhage tail assembly protein I1e-41168
NC_015379:4630367:466368846636884664275588Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative phage tail assembly protein4e-39160
NC_014121:1682638:171629217162921716774483Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative phage tail assembly protein3e-38157
NC_013892:671000:672163672163672801639Xenorhabdus bovienii SS-2004 chromosome, complete genomephage tail assembly protein3e-37154
NC_007434:1809946:181283118128311813397567Burkholderia pseudomallei 1710b chromosome I, complete sequenceBacteriophage lambda tail assembly protein I1e-36152
NC_020063:2531643:255203925520392552668630Enterobacteriaceae bacterium strain FGI 57, complete genomephage-related protein, tail component9e-37152
NC_017047:1934430:193443019344301935047618Rahnella aquatilis HX2 chromosome, complete genomelambda tail assembly I1e-33142
NC_016816:2925459:294507829450782945695618Pantoea ananatis LMG 5342, complete genomeputative lambda tail assembly I1e-28125
NC_014838:254322:256162256162256785624Pantoea sp. At-9b plasmid pPAT9B01, complete sequencelambda tail assembly I2e-28125
NC_007712:1791766:180743018074301808026597Sodalis glossinidius str. 'morsitans', complete genomeputative phage tail assembly protein2e-26118
NC_007712:2806500:280659528065952807191597Sodalis glossinidius str. 'morsitans', complete genomeputative phage tail assembly protein2e-26118
NC_013941:1014386:101503610150361015683648Escherichia coli O55:H7 str. CB9615 chromosome, complete genometail component of prophage CP-933K3e-21101
NC_002655:919654:919654919654920301648Escherichia coli O157:H7 EDL933, complete genomeputative tail component of prophage CP-933K7e-21100
NC_002695:917509:918006918006918653648Escherichia coli O157:H7 str. Sakai, complete genomeputative tail assembly protein7e-21100
NC_013008:918215:922964922964923611648Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail component of prophage CP-933K7e-21100
NC_011601:756885:761117761117761758642Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometail assembly protein7e-21100
NC_013941:5317424:534433553443355344976642Escherichia coli O55:H7 str. CB9615 chromosome, complete genometail component of prophage CP-933K5e-2097.4
NC_011745:2025725:203444420344442035124681Escherichia coli ED1a chromosome, complete genometail assembly protein I2e-1995.5
NC_013353:867869:867869867869868510642Escherichia coli O103:H2 str. 12009, complete genometail assembly protein3e-1994.7
AP010958:867869:867869867869868510642Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative tail assembly protein3e-1994.7
NC_008563:5011997:503867150386715039318648Escherichia coli APEC O1, complete genomeputative tail component of prophage CP-933K3e-1994.4
NC_011742:4962008:498868149886814989328648Escherichia coli S88 chromosome, complete genomeTail assembly protein I from prophage3e-1994.4
NC_013364:863209:875333875333876010678Escherichia coli O111:H- str. 11128, complete genomeputative tail assembly protein7e-1993.6
NC_002695:2655445:267672526767252677402678Escherichia coli O157:H7 str. Sakai, complete genomeputative tail assembly protein7e-1993.6
NC_002695:2158314:216677621667762167453678Escherichia coli O157:H7 str. Sakai, complete genomeputative tail assembly protein7e-1993.6
NC_002695:2893951:290279629027962903473678Escherichia coli O157:H7 str. Sakai, complete genomeputative tail assembly protein7e-1993.6
NC_011750:1931384:194081919408191941499681Escherichia coli IAI39 chromosome, complete genometail assembly protein I7e-1993.6
NC_011750:919953:927613927613928293681Escherichia coli IAI39 chromosome, complete genometail assembly protein I7e-1993.6
NC_011751:1377457:138795313879531388633681Escherichia coli UMN026 chromosome, complete genomeTail assembly protein I9e-1993.2
NC_013361:2169948:217848121784812179161681Escherichia coli O26:H11 str. 11368 chromosome, complete genometail assembly protein1e-1892.8
AP010958:1472506:148215114821511482828678Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative tail assembly protein1e-1892.8
NC_013353:1472506:148215114821511482828678Escherichia coli O103:H2 str. 12009, complete genometail assembly protein1e-1892.8
NC_011601:1077548:107754810775481078195648Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometail assembly protein2e-1892.4
NC_013941:338121:338121338121338792672Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeTail assembly protein I2e-1892
NC_013361:1896446:190843019084301909110681Escherichia coli O26:H11 str. 11368 chromosome, complete genometail assembly protein2e-1892
NC_013361:1593543:160267516026751603355681Escherichia coli O26:H11 str. 11368 chromosome, complete genometail assembly protein2e-1892
NC_013364:1997891:201816120181612018841681Escherichia coli O111:H- str. 11128, complete genomeputative tail assembly protein3e-1891.3
NC_002655:1909139:192092819209281921605678Escherichia coli O157:H7 EDL933, complete genomeputative tail component of prophage CP-933O3e-1891.3
NC_013353:2272919:229339722933972294077681Escherichia coli O103:H2 str. 12009, complete genometail assembly protein4e-1890.9
AP010958:2272919:229339722933972294077681Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative tail assembly protein4e-1890.9
AP010958:1305712:130571213057121306392681Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative tail assembly protein6e-1890.5
NC_013353:1305712:130571213057121306392681Escherichia coli O103:H2 str. 12009, complete genometail assembly protein6e-1890.5
NC_011742:585908:596469596469597149681Escherichia coli S88 chromosome, complete genomeTail assembly protein I9e-1889.7
NC_011274:1299475:130011013001101300814705Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91tail assembly protein9e-1889.7
NC_011745:1055354:106748410674841068164681Escherichia coli ED1a chromosome, complete genometail assembly protein I2e-1789
NC_013361:649518:649518649518650150633Escherichia coli O26:H11 str. 11368 chromosome, complete genometail assembly protein2e-1788.6
NC_011751:680417:680417680417681088672Escherichia coli UMN026 chromosome, complete genomeTail assembly protein I2e-1788.6
NC_004431:1352906:136352613635261364140615Escherichia coli CFT073, complete genomePutative tail assembly protein of cryptic prophage3e-1788.2
NC_013361:3597812:362040536204053621085681Escherichia coli O26:H11 str. 11368 chromosome, complete genometail assembly protein3e-1788.2
NC_008563:2041345:205808720580872058758672Escherichia coli APEC O1, complete genometail assembly protein I5e-1787.4
NC_013364:1477248:147724814772481477928681Escherichia coli O111:H- str. 11128, complete genomeputative tail assembly protein6e-1787
NC_013364:2522888:254354925435492544229681Escherichia coli O111:H- str. 11128, complete genomeputative tail assembly protein6e-1787
NC_013364:3312379:332346633234663324146681Escherichia coli O111:H- str. 11128, complete genomeputative tail assembly protein6e-1787
NC_011353:921500:921506921506922018513Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage lambda tail assembly protein I1e-1686.3
NC_011353:1716037:171603717160371716615579Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage lambda tail assembly protein I2e-1685.1
NC_016810:2719779:273854427385442739191648Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein2e-1685.1
NC_016856:2773995:279238627923862793033648Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stail assembly protein I-like protein2e-1685.1
NC_016857:2719779:273854427385442739191648Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74Tail assembly protein I2e-1685.1
NC_016863:2721826:274059127405912741238648Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1tail assembly protein I-like protein2e-1685.1
NC_013008:2889743:289858928985892899167579Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail assembly protein5e-1684
NC_011353:2892265:289829528982952898873579Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage lambda tail assembly protein I5e-1684
AP010958:2134556:215137821513782152049672Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative tail assembly protein7e-1683.6
NC_013353:2134556:215137821513782152049672Escherichia coli O103:H2 str. 12009, complete genometail assembly protein7e-1683.6
NC_011353:1195179:120679712067971207378582Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage lambda tail assembly protein I7e-1683.6
NC_011353:2563056:258433725843372584915579Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage lambda tail assembly protein I7e-1683.6
NC_013008:2561586:258331725833172583895579Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail assembly protein7e-1683.6
NC_013008:1761165:177235617723561772934579Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail assembly protein3e-1478.6
NC_011353:1761977:177338017733801773958579Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage lambda tail assembly protein I3e-1478.6
NC_010404:55908:725687256873266699Acinetobacter baumannii plasmid p3ABAYE, complete sequenceputative phage-related protein3e-1374.7
NC_011080:2722492:274088927408892741395507Salmonella enterica subsp. enterica serovar Newport str. SL254,bacteriophage lambda tail assembly protein I2e-1271.6
NC_002655:2730659:275208527520852752621537Escherichia coli O157:H7 EDL933, complete genomeputative tail fiber component I of prophage CP-933U1e-1169.7
NC_013856:595496:6139536139536183084356Azospirillum sp. B510 plasmid pAB510b, complete sequencehost specificity protein J1e-0859.7