Pre_GI Gene

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Host: NC_013008 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013008:2561586 Escherichia coli O157:H7 str. TW14359 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli O157:H7 str. TW14359 was isolated from spinach during the E. coli outbreak in 2006. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25606772561597921hypothetical proteinBLASTP
25615862562056471DNA mismatch endonuclease of very short patch repairQuickGO ontologyBLASTP
256203725634551419DNA cytosine methylaseQuickGO ontologyBLASTP
25635222564217696hypothetical proteinBLASTP
25643132564621309inner membrane proteinQuickGO ontologyBLASTP
25648042564917114hypothetical proteinBLASTP
25651882565832645outer membrane proteinQuickGO ontologyBLASTP
25657992566374576outer membrane proteinQuickGO ontologyBLASTP
25665832566786204hypothetical proteinBLASTP
25668022566945144hypothetical proteinBLASTP
25669662567817852chaperone protein HchAQuickGO ontologyBLASTP
256792525692831359sensory kinase in two-component regulatory system with YedWQuickGO ontologyBLASTP
25692832569954672transcriptional regulatory protein YedWQuickGO ontologyBLASTP
25700872570500414hypothetical proteinBLASTP
257060825716121005sulfite oxidase subunit YedYQuickGO ontologyBLASTP
25716132572248636sulfite oxidase subunit YedZQuickGO ontologyBLASTP
25725052573155651hypothetical proteinBLASTP
25732652573414150hypothetical proteinBLASTP
25734982574028531cytochromeQuickGO ontologyBLASTP
25745982574957360hypothetical proteinBLASTP
25752992575817519translocated type III secretion system effectorQuickGO ontologyBLASTP
257614225771551014Tir-cytoskeleton coupling protein TccPQuickGO ontologyBLASTP
25772812577550270tail fiber proteinQuickGO ontologyBLASTP
257755225788651314tail fiber proteinQuickGO ontologyBLASTP
25789302579529600AilLom family proteinQuickGO ontologyBLASTP
25833172583895579tail assembly proteinQuickGO ontologyBLASTP
25838922584527636tail fiber componentQuickGO ontologyBLASTP