Pre_GI: OUP Neighbours

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Query: NC_015709:1459838 Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, complete

D: 32.7494

Host Lineage: Zymomonas mobilis; Zymomonas; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: Country: United Kingdom; Isolation: Sick cider; Temp: Mesophile. The natural habitat of this organism includes sugar-rich plant saps where the bacterium ferments sugar to ethanol. The high conversion of sugars to ethanol makes this organism useful in industrial production systems, particularly in production of bioethanol for fuel. A recombinant strain of this bacterium is utilized for the conversion of sugars, particularly xylose, which is not utilized by another common sugar-fermenting organism such as yeast, to ethanol. Since xylose is a common breakdown product of cellulose or a waste component of the agricultural industry, it is an attractive source for ethanol production. Zymomonas mobilis was chosen for this process as it is ethanol-tolerant (up to 120 grams of ethanol per litre) and productive (5-10% more ethanol than Saccharomyces). This bacterium ferments using the Enter-Doudoroff pathway, with the result that less carbon is used in cellular biomass production and more ends up as ethanol, another factor that favors this organism for ethanol production.

Number of Neighbours: 152




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_006369:3058000*Legionella pneumophila str. Lens, complete genome75.8578 %Subject Query21.8628
NC_008783:29972*Bartonella bacilliformis KC583, complete genome75.1011 %Subject Query21.9601
NC_011527:1113217Coxiella burnetii CbuG_Q212, complete genome75.6924 %Subject Query22.3158
NC_010117:980313Coxiella burnetii RSA 331, complete genome75.3431 %Subject ←→ Query22.8964
NC_002971:780502Coxiella burnetii RSA 493, complete genome76.2132 %Subject ←→ Query23.0652
NC_011528:647401Coxiella burnetii CbuK_Q154, complete genome75.4902 %Subject ←→ Query23.1688
NC_015519:2739347*Tepidanaerobacter sp. Re1 chromosome, complete genome75.5362 %Subject ←→ Query23.2551
NC_013061:2775623Pedobacter heparinus DSM 2366, complete genome76.1673 %Subject ←→ Query24.6656
NC_006526:1472781Zymomonas mobilis subsp. mobilis ZM4, complete genome79.0656 %Subject ←→ Query25.8246
NC_015277:2702056Sphingobacterium sp. 21 chromosome, complete genome76.6881 %Subject ←→ Query26.4413
NC_015222:2475792*Nitrosomonas sp. AL212 chromosome, complete genome75.3125 %Subject ←→ Query26.7854
NC_015177:1476073Pedobacter saltans DSM 12145 chromosome, complete genome76.3235 %Subject ←→ Query27.0252
NC_015731:1062824*Nitrosomonas sp. Is79A3 chromosome, complete genome75.3523 %Subject ←→ Query27.365
NC_007954:1823085*Shewanella denitrificans OS217, complete genome75.4075 %Subject ←→ Query27.7501
NC_015177:2642368*Pedobacter saltans DSM 12145 chromosome, complete genome75.193 %Subject ←→ Query27.7772
NC_008783:222000*Bartonella bacilliformis KC583, complete genome77.595 %Subject ←→ Query28.2988
NC_015224:4101939*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.9681 %Subject ←→ Query28.505
NC_015224:1440283Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,76.2623 %Subject ←→ Query28.5415
NC_015224:1641819*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.0613 %Subject ←→ Query28.5984
NC_013895:66641*Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete76.6176 %Subject ←→ Query28.6544
NC_015731:2460248*Nitrosomonas sp. Is79A3 chromosome, complete genome75.4473 %Subject ←→ Query28.8132
NC_000964:1474451Bacillus subtilis subsp. subtilis str. 168, complete genome75.337 %Subject ←→ Query28.8546
NC_013895:1203000Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete75.8793 %Subject ←→ Query29.5055
NC_015731:2148517*Nitrosomonas sp. Is79A3 chromosome, complete genome75.1501 %Subject ←→ Query29.7647
NC_005810:4224500Yersinia pestis biovar Microtus str. 91001, complete genome75.0184 %Subject ←→ Query29.8821
NC_013960:3379515*Nitrosococcus halophilus Nc4 chromosome, complete genome76.3143 %Subject ←→ Query29.9763
NC_015577:1170186Treponema azotonutricium ZAS-9 chromosome, complete genome78.4743 %Subject ←→ Query29.9884
NC_008149:1556581Yersinia pestis Nepal516, complete genome75.095 %Subject ←→ Query30.0077
NC_006155:713174*Yersinia pseudotuberculosis IP 32953, complete genome75.0245 %Subject ←→ Query30.0948
NC_008346:2370254Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete76.5993 %Subject ←→ Query30.1892
NC_010531:292044*Polynucleobacter necessarius STIR1, complete genome75.1409 %Subject ←→ Query30.3854
NC_015731:3274739*Nitrosomonas sp. Is79A3 chromosome, complete genome75.1869 %Subject ←→ Query30.5469
NC_010159:809663Yersinia pestis Angola, complete genome75.4504 %Subject ←→ Query30.5995
NC_007954:1324062*Shewanella denitrificans OS217, complete genome75.1746 %Subject ←→ Query30.7014
NC_014152:397177Thermincola sp. JR, complete genome75.1624 %Subject ←→ Query30.7016
NC_012962:869295Photorhabdus asymbiotica, complete genome75.4105 %Subject ←→ Query30.8366
NC_007907:1996194Desulfitobacterium hafniense Y51, complete genome77.2641 %Subject ←→ Query31.019
NC_015177:258504*Pedobacter saltans DSM 12145 chromosome, complete genome76.8382 %Subject ←→ Query31.168
NC_007907:4859735Desulfitobacterium hafniense Y51, complete genome75.2727 %Subject ←→ Query31.2044
NC_012214:1588573Erwinia pyrifoliae Ep1/96, complete genome76.9669 %Subject ←→ Query31.3445
NC_012881:2310141*Desulfovibrio salexigens DSM 2638, complete genome75.046 %Subject ←→ Query31.4164
NC_013416:1621469Aggregatibacter actinomycetemcomitans D11S-1, complete genome75.9375 %Subject ←→ Query31.4418
NC_010465:660207Yersinia pseudotuberculosis YPIII, complete genome76.4216 %Subject ←→ Query31.5013
NC_010159:3502350Yersinia pestis Angola, complete genome75.1011 %Subject ←→ Query31.5996
NC_011830:4951716Desulfitobacterium hafniense DCB-2, complete genome76.0325 %Subject ←→ Query31.6622
NC_010794:1476494*Methylacidiphilum infernorum V4, complete genome75.1624 %Subject ←→ Query31.683
NC_007907:5404608Desulfitobacterium hafniense Y51, complete genome76.1581 %Subject ←→ Query31.7141
NC_011830:3081726*Desulfitobacterium hafniense DCB-2, complete genome76.9638 %Subject ←→ Query31.7425
NC_011830:4399642Desulfitobacterium hafniense DCB-2, complete genome76.9792 %Subject ←→ Query31.7789
NC_013132:7954000*Chitinophaga pinensis DSM 2588, complete genome76.7096 %Subject ←→ Query31.7994
NC_016023:1874827Bacillus coagulans 36D1 chromosome, complete genome75.8149 %Subject ←→ Query31.8665
NC_011026:3009500*Chloroherpeton thalassium ATCC 35110, complete genome77.3101 %Subject ←→ Query31.8736
NC_015731:1578106Nitrosomonas sp. Is79A3 chromosome, complete genome76.296 %Subject ←→ Query31.8941
NC_011026:2533017*Chloroherpeton thalassium ATCC 35110, complete genome76.3817 %Subject ←→ Query31.9226
NC_008346:2523289Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete75.0306 %Subject ←→ Query32.008
NC_015732:140087Spirochaeta caldaria DSM 7334 chromosome, complete genome75.5116 %Subject ←→ Query32.165
NC_002936:285527Dehalococcoides ethenogenes 195, complete genome75.0766 %Subject ←→ Query32.2239
NC_015224:3291736Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.2665 %Subject ←→ Query32.2452
NC_012108:2220983*Desulfobacterium autotrophicum HRM2, complete genome75.4841 %Subject ←→ Query32.3332
NC_015732:3145634*Spirochaeta caldaria DSM 7334 chromosome, complete genome76.7188 %Subject ←→ Query32.5055
NC_008150:3015000Yersinia pestis Antiqua, complete genome75.3156 %Subject ←→ Query32.6848
NC_015172:1621223Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome75.9865 %Subject ←→ Query32.773
NC_015732:3105649Spirochaeta caldaria DSM 7334 chromosome, complete genome75.9375 %Subject ←→ Query32.7882
NC_007907:4926548Desulfitobacterium hafniense Y51, complete genome76.3511 %Subject ←→ Query32.7918
NC_003143:3583468Yersinia pestis CO92, complete genome75.8241 %Subject ←→ Query32.8125
NC_013895:605488*Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete75.5882 %Subject ←→ Query32.8408
NC_012914:5194791Paenibacillus sp. JDR-2, complete genome75.6127 %Subject ←→ Query33.2273
NC_005810:754340Yersinia pestis biovar Microtus str. 91001, complete genome75.2788 %Subject ←→ Query33.2368
NC_010634:1056441Yersinia pseudotuberculosis PB1/+, complete genome75.2941 %Subject ←→ Query33.4088
NC_004088:1075454Yersinia pestis KIM, complete genome75.1869 %Subject ←→ Query33.442
NC_006155:1074298Yersinia pseudotuberculosis IP 32953, complete genome75.7476 %Subject ←→ Query33.4613
NC_014976:2420000Bacillus subtilis BSn5 chromosome, complete genome75.3033 %Subject ←→ Query33.5606
NC_008149:1002453Yersinia pestis Nepal516, complete genome75.0582 %Subject ←→ Query33.6155
NC_015589:1439794*Desulfotomaculum ruminis DSM 2154 chromosome, complete genome77.0404 %Subject ←→ Query33.7336
NC_013421:1819036Pectobacterium wasabiae WPP163, complete genome75.386 %Subject ←→ Query34.0279
NC_011830:1037520Desulfitobacterium hafniense DCB-2, complete genome77.4112 %Subject ←→ Query34.1988
NC_015589:2049328Desulfotomaculum ruminis DSM 2154 chromosome, complete genome75.5484 %Subject ←→ Query34.2057
NC_015732:529201*Spirochaeta caldaria DSM 7334 chromosome, complete genome77.1783 %Subject ←→ Query34.248
NC_015731:2950874*Nitrosomonas sp. Is79A3 chromosome, complete genome75.4412 %Subject ←→ Query34.276
NC_012881:3004784Desulfovibrio salexigens DSM 2638, complete genome75.1164 %Subject ←→ Query34.3173
NC_015589:1468774Desulfotomaculum ruminis DSM 2154 chromosome, complete genome77.6501 %Subject ←→ Query34.3226
NC_016023:2163000*Bacillus coagulans 36D1 chromosome, complete genome75.867 %Subject ←→ Query34.5001
NC_015589:3241364*Desulfotomaculum ruminis DSM 2154 chromosome, complete genome75.5362 %Subject ←→ Query34.5218
NC_010694:1052722Erwinia tasmaniensis, complete genome77.5674 %Subject ←→ Query34.5908
NC_007907:2306561*Desulfitobacterium hafniense Y51, complete genome76.443 %Subject ←→ Query34.6809
NC_007356:1165760*Dehalococcoides sp. CBDB1, complete genome75.4228 %Subject ←→ Query34.8333
NC_009654:304000Marinomonas sp. MWYL1, complete genome75.5147 %Subject ←→ Query34.9258
NC_009831:4539952Shewanella sediminis HAW-EB3, complete genome76.2377 %Subject ←→ Query35.4964
NC_007484:130896Nitrosococcus oceani ATCC 19707, complete genome75.8364 %Subject ←→ Query35.6153
NC_011830:4722607Desulfitobacterium hafniense DCB-2, complete genome75.3094 %Subject ←→ Query35.7585
NC_015224:1391088Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.1409 %Subject ←→ Query36.0736
NC_012997:2405500*Teredinibacter turnerae T7901, complete genome75.5515 %Subject ←→ Query36.1474
NC_004547:3207776*Erwinia carotovora subsp. atroseptica SCRI1043, complete genome75.962 %Subject ←→ Query36.2193
NC_007907:4956500Desulfitobacterium hafniense Y51, complete genome77.3376 %Subject ←→ Query36.3707
NC_014364:667841Spirochaeta smaragdinae DSM 11293 chromosome, complete genome75.3768 %Subject ←→ Query36.4759
NC_015224:3587500Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,76.1244 %Subject ←→ Query36.7592
NC_014315:114151Nitrosococcus watsoni C-113 chromosome, complete genome77.0956 %Subject ←→ Query36.9613
NC_015589:814530Desulfotomaculum ruminis DSM 2154 chromosome, complete genome75.9559 %Subject ←→ Query37.0664
NC_015224:1763848Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.5392 %Subject ←→ Query37.1095
NC_010465:3465351Yersinia pseudotuberculosis YPIII, complete genome75.867 %Subject ←→ Query37.2718
NC_015577:1462874Treponema azotonutricium ZAS-9 chromosome, complete genome76.5962 %Subject ←→ Query37.29
NC_011830:4234392*Desulfitobacterium hafniense DCB-2, complete genome75.9191 %Subject ←→ Query37.6202
NC_010159:1288000Yersinia pestis Angola, complete genome75.0551 %Subject ←→ Query37.7291
NC_013421:1696746*Pectobacterium wasabiae WPP163, complete genome76.5227 %Subject ←→ Query37.8565
NC_010465:1118147Yersinia pseudotuberculosis YPIII, complete genome75.1226 %Subject ←→ Query37.9281
NC_006155:1191307Yersinia pseudotuberculosis IP 32953, complete genome76.2071 %Subject ←→ Query38.0676
NC_007907:3722500Desulfitobacterium hafniense Y51, complete genome75.9038 %Subject ←→ Query38.1854
NC_005810:872672Yersinia pestis biovar Microtus str. 91001, complete genome75.7629 %Subject ←→ Query38.2167
NC_008639:2968000*Chlorobium phaeobacteroides DSM 266, complete genome75.1287 %Subject ←→ Query38.2214
NC_014315:3004125Nitrosococcus watsoni C-113 chromosome, complete genome77.3928 %Subject ←→ Query38.6036
NC_004088:1196875Yersinia pestis KIM, complete genome75.3309 %Subject ←→ Query38.6959
NC_015572:1252000Methylomonas methanica MC09 chromosome, complete genome77.4694 %Subject ←→ Query38.7541
NC_010634:4463727Yersinia pseudotuberculosis PB1/+, complete genome76.3695 %Subject ←→ Query38.8379
NC_008149:1122693Yersinia pestis Nepal516, complete genome76.3817 %Subject ←→ Query38.8481
NC_015277:3351504*Sphingobacterium sp. 21 chromosome, complete genome75.2175 %Subject ←→ Query38.8988
NC_005810:3142384Yersinia pestis biovar Microtus str. 91001, complete genome75.1103 %Subject ←→ Query38.9748
NC_014010:1020488Candidatus Puniceispirillum marinum IMCC1322 chromosome, complete77.3744 %Subject ←→ Query39.1073
NC_007712:1219957Sodalis glossinidius str. 'morsitans', complete genome75.4718 %Subject ←→ Query39.2078
NC_008150:2878450Yersinia pestis Antiqua, complete genome75.7935 %Subject ←→ Query39.2215
NC_011149:4677412Salmonella enterica subsp. enterica serovar Agona str. SL483,75.5331 %Subject ←→ Query39.2668
NC_014010:175500*Candidatus Puniceispirillum marinum IMCC1322 chromosome, complete75.5944 %Subject ←→ Query39.5081
NC_004547:1600900Erwinia carotovora subsp. atroseptica SCRI1043, complete genome76.3021 %Subject ←→ Query39.6404
NC_009454:2663539*Pelotomaculum thermopropionicum SI, complete genome75.8701 %Subject ←→ Query39.9907
NC_015577:3113907Treponema azotonutricium ZAS-9 chromosome, complete genome77.7114 %Subject ←→ Query40.0715
NC_010634:1175404Yersinia pseudotuberculosis PB1/+, complete genome75.9681 %Subject ←→ Query40.1563
NC_015277:6213304*Sphingobacterium sp. 21 chromosome, complete genome75.9773 %Subject ←→ Query41.8101
NC_002655:4653160Escherichia coli O157:H7 EDL933, complete genome75.1961 %Subject ←→ Query42.393
NC_015578:247266*Treponema primitia ZAS-2 chromosome, complete genome77.4142 %Subject ←→ Query42.47
NC_015567:1660462Serratia sp. AS9 chromosome, complete genome76.7371 %Subject ←→ Query42.6158
NC_002695:4584177Escherichia coli O157:H7 str. Sakai, complete genome75.6587 %Subject Query42.9915
NC_015578:3980496Treponema primitia ZAS-2 chromosome, complete genome77.0987 %Subject Query43.2228
CP002185:3167738*Escherichia coli W, complete genome75.1777 %Subject Query43.2755
NC_009801:3175714Escherichia coli E24377A, complete genome75.0184 %Subject Query43.3236
CU928160:3030324*Escherichia coli IAI1 chromosome, complete genome75.3891 %Subject Query43.3448
AP010958:3474077*Escherichia coli O103:H2 str. 12009 DNA, complete genome75.2512 %Subject Query43.389
NC_015578:423000Treponema primitia ZAS-2 chromosome, complete genome75.9681 %Subject Query43.9608
NC_015566:1659288Serratia sp. AS12 chromosome, complete genome76.1121 %Subject Query44.7005
NC_013421:3279499Pectobacterium wasabiae WPP163, complete genome77.5643 %Subject Query44.7246
NC_010694:2138000Erwinia tasmaniensis, complete genome75.2574 %Subject Query44.7597
NC_012917:1840172*Pectobacterium carotovorum subsp. carotovorum PC1, complete genome77.8309 %Subject Query45.0216
NC_012917:1506083Pectobacterium carotovorum subsp. carotovorum PC1, complete genome77.1875 %Subject Query45.1848
NC_009792:3245368Citrobacter koseri ATCC BAA-895, complete genome75.579 %Subject Query45.1868
NC_006905:4638707*Salmonella enterica subsp. enterica serovar Choleraesuis str78.7898 %Subject Query45.4121
NC_012214:2221702*Erwinia pyrifoliae Ep1/96, complete genome75.0337 %Subject Query46.3016
NC_004631:948054*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete76.0539 %Subject Query46.3441
NC_004547:1873390*Erwinia carotovora subsp. atroseptica SCRI1043, complete genome76.201 %Subject Query46.3542
NC_013421:1173051Pectobacterium wasabiae WPP163, complete genome75.6526 %Subject Query46.6213
NC_009832:1719149Serratia proteamaculans 568, complete genome75.3523 %Subject Query48.0067
NC_004547:1174650*Erwinia carotovora subsp. atroseptica SCRI1043, complete genome75.5484 %Subject Query48.0379
NC_009092:1599526Shewanella loihica PV-4, complete genome77.7512 %Subject Query50.5468
NC_009792:3665369Citrobacter koseri ATCC BAA-895, complete genome75.0398 %Subject Query51.8195
NC_012880:3421500*Dickeya dadantii Ech703, complete genome76.3388 %Subject Query54.2571