Pre_GI Gene

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Host: NC_009831 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009831:4539952 Shewanella sediminis HAW-EB3, complete genome

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
45399524540551600cobalbumin biosynthesis enzymeQuickGO ontologyBLASTP
45405484541321774cobalamin 5-phosphate synthaseQuickGO ontologyBLASTP
454142945424571029Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseQuickGO ontologyBLASTP
454268845438181131transport system permease proteinQuickGO ontologyBLASTP
45438084544743936ABC transporter-related proteinQuickGO ontologyBLASTP
45459014546587687phosphoglycerate mutaseQuickGO ontologyBLASTP
454673245495842853Naproline symporter-like proteinQuickGO ontologyBLASTP
455007145538293759methionine synthaseQuickGO ontologyBLASTP
45548634555117255hypothetical protein
455530545563901086FAD-dependent pyridine nucleotide-disulfide oxidoreductaseQuickGO ontologyBLASTP
45565514557429879conserved hypothetical transcriptional regulatorQuickGO ontologyBLASTP
45575124557964453hypothetical proteinBLASTP
455804745597681722Nitrite reductase cytochrome ammonia-formingQuickGO ontologyBLASTP
45604724560717246hypothetical proteinBLASTP
456135045639532604Protein-PII uridylyltransferaseQuickGO ontologyBLASTP
456461445658191206hypothetical protein
456654045675741035hypothetical proteinBLASTP
456779445695121719hypothetical proteinBLASTP
45695234570470948serine protease subtilase familyQuickGO ontologyBLASTP
45706854571113429nucleaseQuickGO ontologyBLASTP
45720544572347294TM2 domain containing proteinB7201QuickGO ontologyBLASTP
45728324573485654putative glutathione S-transferaseQuickGO ontologyBLASTP
457356945758122244peptidase U32QuickGO ontologyBLASTP
45760014576249249hypothetical protein
457662445777901167peptidase M19 renal dipeptidaseQuickGO ontologyBLASTP
45778234578500678oxidoreductase 2OG-FeII oxygenase familyQuickGO ontologyBLASTP
457877545800281254hypothetical proteinBLASTP