Pre_GI Gene

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Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:4638707 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
46387074639705999L-idonate regulator GalRLacI familyQuickGO ontologyBLASTP
463976946412021434GntP family L-idonate transport proteinQuickGO ontologyBLASTP
46411504641914765gluconate 5-dehydrogenaseQuickGO ontologyBLASTP
464193946429701032L-idonate 5-dehydrogenaseQuickGO ontologyBLASTP
46431874643717531D-gluconate kinase thermosensitiveQuickGO ontologyBLASTP
464374546447641020putative alcohol dehydrogenaseQuickGO ontologyBLASTP
4644987464507185tRNA-LeuQuickGO ontologyBLASTP
46466194647488870hypothetical proteinBLASTP
46485344648704171hypothetical protein
46489934649364372replication proteinQuickGO ontologyBLASTP
46499474650324378hypothetical proteinBLASTP
46506424651313672hypothetical proteinBLASTP
46516004651851252hypothetical proteinBLASTP
46520384652868831hypothetical proteinBLASTP
46538054654170366hypothetical proteinBLASTP
465449146557621272hypothetical proteinBLASTP
465577346578602088hypothetical proteinBLASTP
465848146595031023hypothetical proteinBLASTP
46601614661036876hypothetical proteinBLASTP
46615144662239726hypothetical proteinBLASTP
466278946644201632putative SAM-dependent methyltransferaseQuickGO ontologyBLASTP
46644254664682258putative cytoplasmic proteinQuickGO ontologyBLASTP
46651704665778609putative cytoplasmic proteinQuickGO ontologyBLASTP
46661324667043912putative cytoplasmic proteinQuickGO ontologyBLASTP
46672484667709462putative inner membrane or exportedQuickGO ontologyBLASTP
46677064668380675putative dienelactone hydrolaseQuickGO ontologyBLASTP
46687304669503774transcriptional repressor for uxu operonQuickGO ontologyBLASTP
466950446705171014tryptophanyl-tRNA synthetaseQuickGO ontologyBLASTP
46708144670966153hypothetical proteinBLASTP
46720054672739735putative aspartate racemaseQuickGO ontologyBLASTP