Pre_GI Gene

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Host: NC_013061 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013061:2775623 Pedobacter heparinus DSM 2366, complete genome

Host Lineage: Pedobacter heparinus; Pedobacter; Sphingobacteriaceae; Sphingobacteriales; Bacteroidetes; Bacteria

General Information: Isolation: Soil; Temp: Mesophile; Temp: 25 - 30C; Habitat: Soil. Formerly Sphingobacterium heparinum this organism was isolated from soil. This organism is able to degrade heparin and heparan sulfate glycosaminoglycans, which are components of extracellular polysaccharides and the cell surface.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
277562327771971575NaH antiporterQuickGO ontologyBLASTP
277720527789831779Cytochrome-c peroxidaseQuickGO ontologyBLASTP
277896727802831317acid phosphataseQuickGO ontologyBLASTP
278040227822671866Transketolase central regionQuickGO ontologyBLASTP
27824492782847399hypothetical proteinBLASTP
27831332783585453Glyoxalasebleomycin resistance proteindioxygenaseQuickGO ontologyBLASTP
27836452783878234hypothetical protein
27841262784545420hypothetical protein
27846242785202579bifunctional deaminase-reductase domain proteinQuickGO ontologyBLASTP
27851992785687489Activator of Hsp90 ATPase 1 family proteinQuickGO ontologyBLASTP
27856982786018321regulatory protein ArsRQuickGO ontologyBLASTP
27862952786648354hypothetical protein
27868672787307441Activator of Hsp90 ATPase 1 family proteinQuickGO ontologyBLASTP
27873862787817432hypothetical proteinBLASTP
27878532788029177hypothetical protein
27880542788233180hypothetical protein
27884272788786360hypothetical proteinBLASTP
27888572789129273hypothetical protein
27892612789827567hypothetical proteinBLASTP
27898392790345507hypothetical protein
279038827935253138DNA polymerase III alpha subunitQuickGO ontologyBLASTP
279353727950391503cytosolic proteinQuickGO ontologyBLASTP
27950422795776735hypothetical proteinBLASTP
27961942796412219hypothetical protein
27964712796707237hypothetical protein
27967352797157423protein of unknown function UPF0047QuickGO ontologyBLASTP
2797235279868914556-phosphogluconate dehydrogenase decarboxylatingQuickGO ontologyBLASTP