Pre_GI: BLASTP Hits

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Query: NC_012796:4075583:4109289 Desulfovibrio magneticus RS-1, complete genome

Start: 4109289, End: 4109567, Length: 279

Host Lineage: Desulfovibrio magneticus; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Isolated from freshwater sulfide-rich mud of a waterway near Kameno river, Wakayama, in Japan. This organism is a sulfate-reducing delta proteobacterium which synthesizes intracellular magnetite particles. Desulfovibrio magneticus produces irregular, membrane-bound magnetite particles, unlike other magnetite-producing bacteria which contain crystalline magnetite in the cytoplasm. Desulfovibrio magneticus does not migrate along a magnetic field but swims randomly.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012796:3267569:327755532775553277833279Desulfovibrio magneticus RS-1, complete genomeHU_IHF family transcriptional regulator3e-28123
NC_020409:560278:568779568779569054276Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeIntegration host factor subunit beta7e-1785.9
NC_009483:2489000:250032325003232500598276Geobacter uraniireducens Rf4 chromosome, complete genomehistone family protein DNA-binding protein3e-1684
NC_016629:2971860:298610929861092986384276Desulfovibrio africanus str. Walvis Bay chromosome, completehistone family protein DNA-binding protein2e-1581.3
NC_002937:1915787:193133319313331931614282Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeDNA-binding protein HU, beta subunit, putative3e-1580.1
NC_011979:3045952:305677330567733057048276Geobacter sp. FRC-32, complete genomehistone family protein DNA-binding protein5e-1579.7
NC_013939:1417750:143906514390651439358294Deferribacter desulfuricans SSM1, complete genomeintegration host factor, subunit beta3e-1167.4
NC_014972:3604534:361615136161513616432282Desulfobulbus propionicus DSM 2032 chromosome, complete genomehistone family protein DNA-binding protein3e-1167
NC_011725:1486635:149603414960341496306273Bacillus cereus B4264 chromosome, complete genomeDNA-binding protein HU3e-1063.9
NC_012108:2159230:216869321686932168923231Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein7e-1062.8
NC_012997:1446037:144955514495551449851297Teredinibacter turnerae T7901, complete genomeintegration host factor, beta subunit1e-0962
NC_009257:1023696:104281710428171043089273Francisella tularensis subsp. tularensis WY96-3418 chromosome,DNA-binding protein HU-beta2e-0961.2
NC_008601:1094041:111318411131841113456273Francisella tularensis subsp. novicida U112, complete genomeDNA-binding protein HU-beta2e-0961.2
NC_012779:1820244:182263618226361822932297Edwardsiella ictaluri 93-146, complete genomeintegration host factor, alpha subunit, putative2e-0960.8
NC_012988:32996:557525575256060309Methylobacterium extorquens DM4, complete genomeintegration host factor3e-0960.8
NC_011757:97281:115544115544115852309Methylobacterium chloromethanicum CM4, complete genomeintegration host factor, beta subunit3e-0960.8
NC_002939:2844240:286990028699002870190291Geobacter sulfurreducens PCA, complete genomeDNA-binding protein HU3e-0960.8
NC_016631:5378810:539409553940955394448354Granulicella mallensis MP5ACTX8 chromosome, complete genomehistone family protein DNA-binding protein3e-0960.5
NC_020126:8080574:808535780853578085707351Myxococcus stipitatus DSM 14675, complete genomeintegration host factor subunit beta4e-0960.1
NC_007626:959684:993045993045993323279Magnetospirillum magneticum AMB-1, complete genomeBacterial nucleoid DNA-binding protein5e-0959.7
NC_014152:191200:195060195060195332273Thermincola sp. JR, complete genomehistone family protein DNA-binding protein5e-0959.7
NC_000964:2146000:222453322245332224811279Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein6e-0959.7
NC_008570:2216736:221933122193312219603273Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeDNA-binding protein HU-beta8e-0959.3
NC_008095:4189082:419269841926984193087390Myxococcus xanthus DK 1622, complete genomeintegration host factor, alpha subunit8e-0958.9
NC_014623:4999032:500264050026405003044405Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeintegration host factor subunit alpha8e-0958.9
NC_007626:1038214:104975510497551050087333Magnetospirillum magneticum AMB-1, complete genomeBacterial nucleoid DNA-binding protein1e-0858.9
NC_007626:2354260:236467623646762364954279Magnetospirillum magneticum AMB-1, complete genomeBacterial nucleoid DNA-binding protein2e-0858.2
NC_009437:1556934:156381915638191564106288Caldicellulosiruptor saccharolyticus DSM 8903, complete genomehistone family protein DNA-binding protein2e-0858.2
NC_015589:2555000:256458325645832564867285Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehistone family protein DNA-binding protein1e-0858.2
NC_007645:2204066:221540322154032215675273Hahella chejuensis KCTC 2396, complete genomeBacterial nucleoid DNA-binding protein2e-0857.8
NC_007930:50801:564885648856763276Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,DNA-binding protein HU2e-0857.8
NC_009380:4729340:473195847319584732233276Salinispora tropica CNB-440 chromosome, complete genomehistone family protein DNA-binding protein2e-0857.8
NC_012912:2216749:224010222401022240401300Dickeya zeae Ech1591, complete genomeintegration host factor, alpha subunit2e-0857.4
NC_012880:2425330:242608824260882426387300Dickeya dadantii Ech703, complete genomeintegration host factor, alpha subunit3e-0857.4
NC_009434:2577717:258467925846792584981303Pseudomonas stutzeri A1501, complete genomeintegration host factor subunit alpha4e-0857
NC_015740:2407500:244176324417632442065303Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeintegration host factor subunit alpha4e-0857
NC_007484:1975322:199732119973211997593273Nitrosococcus oceani ATCC 19707, complete genomeHistone-like DNA-binding protein4e-0857
NC_007517:3430237:345142234514223451715294Geobacter metallireducens GS-15, complete genomeHistone-like DNA-binding protein3e-0857
NC_003197:1401603:141906914190691419368300Salmonella typhimurium LT2, complete genomeintegration host factor alpha subunit4e-0856.6
NC_010658:1772994:178698617869861787285300Shigella boydii CDC 3083-94, complete genomeintegration host factor, alpha subunit4e-0856.6
NC_007613:1353500:135795113579511358250300Shigella boydii Sb227, complete genomeintegration host factor, alpha subunit4e-0856.6
NC_016002:1326500:133361313336131333909297Pseudogulbenkiania sp. NH8B, complete genomeintegration host factor subunit alpha5e-0856.6
NC_014307:1619000:162263816226381623060423Ralstonia solanacearum CFBP2957 chromosome, complete genomeintegration host factor (ihf) subunit alpha5e-0856.6
NC_018080:2288700:229534022953402295642303Pseudomonas aeruginosa DK2 chromosome, complete genomeintegration host factor subunit alpha5e-0856.6
NC_009656:2512733:251937325193732519675303Pseudomonas aeruginosa PA7 chromosome, complete genomeintegration host factor subunit alpha5e-0856.6
NC_002516:3079850:309981030998103100112303Pseudomonas aeruginosa PAO1, complete genomeintegration host factor subunit alpha5e-0856.6
NC_008463:2467219:247385924738592474161303Pseudomonas aeruginosa UCBPP-PA14, complete genomeintegration host factor, alpha subunit5e-0856.6
NC_011083:1408202:142411214241121424411300Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,integration host factor, alpha subunit4e-0856.6
NC_004631:1271500:128751212875121287811300Salmonella enterica subsp. enterica serovar Typhi Ty2, completeintegration host factor alpha subunit4e-0856.6
NC_011147:1573470:157465315746531574952300Salmonella enterica subsp. enterica serovar Paratyphi A strintegration host factor subunit alpha4e-0856.6
NC_020063:2011019:202932820293282029627300Enterobacteriaceae bacterium strain FGI 57, complete genomeintegration host factor, alpha subunit4e-0856.6
NC_017046:1358531:137599713759971376296300Salmonella enterica subsp. enterica serovar Typhimurium str. 798integration host factor subunit alpha4e-0856.6
NC_016863:1359769:137723513772351377534300Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1integration host factor subunit alpha4e-0856.6
NC_016860:1399290:141675614167561417055300Salmonella enterica subsp. enterica serovar Typhimurium strintegration host factor subunit alpha4e-0856.6
NC_016857:1358456:137592213759221376221300Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74integration host factor subunit alpha4e-0856.6
NC_016856:1411579:142904514290451429344300Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sintegration host factor subunit alpha4e-0856.6
NC_016832:1269018:128648512864851286784300Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Integration host factor subunit alpha4e-0856.6
NC_016831:1166868:118433111843311184630300Salmonella enterica subsp. enterica serovar Gallinarum/pullorumIntegration host factor alpha-subunit4e-0856.6
NC_016810:1358456:137592213759221376221300Salmonella enterica subsp. enterica serovar Typhimurium strintegration host factor subunit alpha4e-0856.6
NC_011770:2499432:250353725035372503839303Pseudomonas aeruginosa LESB58, complete genomeintegration host factor, alpha subunit6e-0856.2
NC_010995:2312901:231914623191462319418273Cellvibrio japonicus Ueda107, complete genomeDNA-binding protein HU superfamily7e-0856.2
NC_015422:1694363:171325817132581713530273Alicycliphilus denitrificans K601 chromosome, complete genomehistone family protein DNA-binding protein8e-0855.8
NC_008609:1976403:204043820404382040710273Pelobacter propionicus DSM 2379, complete genomehistone family protein DNA-binding protein8e-0855.8
NC_021150:1564229:156422915642291564507279Azotobacter vinelandii CA6, complete genomeintegration host factor subunit beta9e-0855.5
NC_012918:1174412:117713711771371177418282Geobacter sp. M21 chromosome, complete genomehistone family protein DNA-binding protein1e-0755.5
NC_011146:3720658:374570537457053745986282Geobacter bemidjiensis Bem, complete genomehistone family protein DNA-binding protein1e-0755.5
NC_018868:569423:571431571431571727297Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeintegration host factor subunit beta1e-0755.1
NC_015410:2144387:215171921517192152003285Pseudomonas mendocina NK-01 chromosome, complete genomeintegration host factor subunit beta1e-0755.1
NC_009439:2038303:204573520457352046022288Pseudomonas mendocina ymp, complete genomeintegration host factor subunit beta1e-0755.1
NC_007517:1792000:180801818080181808308291Geobacter metallireducens GS-15, complete genomeHistone-like DNA-binding protein1e-0755.1
NC_014532:3596097:360212336021233602398276Halomonas elongata DSM 2581, complete genomeK03530 DNA-binding protein HU-beta2e-0754.7
NC_014934:3809845:382531538253153825587273Cellulophaga algicola DSM 14237 chromosome, complete genomehistone family protein DNA-binding protein2e-0754.7
NC_014652:379833:398080398080398358279Caldicellulosiruptor hydrothermalis 108 chromosome, completehistone family protein DNA-binding protein2e-0754.7
NC_008027:2051821:205420720542072054509303Pseudomonas entomophila L48, complete genomeintegration host factor (IHF), alpha subunit, DNA-binding protein, DNA replication2e-0754.7
NC_012660:4558122:458470745847074585009303Pseudomonas fluorescens SBW25 chromosome, complete genomeintegration host factor subunit alpha2e-0754.7
NC_004129:2328491:233756823375682337870303Pseudomonas fluorescens Pf-5, complete genomeintegration host factor alpha subunit2e-0754.7
NC_007492:2203220:220711122071112207413303Pseudomonas fluorescens PfO-1, complete genomeIntegration host factor, alpha subunit2e-0754.7
NC_012034:2623252:263621926362192636497279Anaerocellum thermophilum DSM 6725, complete genomehistone family protein DNA-binding protein2e-0754.7
NC_019745:3066177:308302630830263083310285Gloeocapsa sp. PCC 7428, complete genomehistone family protein DNA-binding protein2e-0754.7
NC_008344:669498:669498669498669770273Nitrosomonas eutropha C91, complete genomehistone family protein DNA-binding protein3e-0754.3
NC_007626:2204767:225746522574652257743279Magnetospirillum magneticum AMB-1, complete genomeBacterial nucleoid DNA-binding protein2e-0754.3
NC_014483:39729:512505125051522273Paenibacillus polymyxa E681 chromosome, complete genomeDNA-binding protein HU (DNA-binding protein II)2e-0754.3
NC_016641:1639356:164996216499621650234273Paenibacillus terrae HPL-003 chromosome, complete genomeDNA-binding protein hu-alpha2e-0754.3
NC_002947:2809591:281624728162472816549303Pseudomonas putida KT2440, complete genomeintegration host factor alpha subunit2e-0754.3
NC_009512:3618055:363133836313383631640303Pseudomonas putida F1, complete genomeintegration host factor, alpha subunit2e-0754.3
NC_020209:4643901:465937146593714659646276Pseudomonas poae RE*1-1-14, complete genomenucleoid protein HU subunit alpha2e-0754.3
NC_008702:1153344:115712611571261157410285Azoarcus sp. BH72, complete genomeprobable integration host factor, beta-subunit3e-0753.9
NC_011770:2046490:205485620548562055140285Pseudomonas aeruginosa LESB58, complete genomeintegration host factor beta subunit3e-0753.9
NC_008463:2017607:202597320259732026257285Pseudomonas aeruginosa UCBPP-PA14, complete genomeintegration host factor beta subunit3e-0753.9
NC_009656:1994392:200277320027732003057285Pseudomonas aeruginosa PA7 chromosome, complete genomeintegration host factor subunit beta3e-0753.9
NC_018080:1834754:184312018431201843404285Pseudomonas aeruginosa DK2 chromosome, complete genomeintegration host factor subunit beta3e-0753.9
NC_003909:3483244:350545735054573505729273Bacillus cereus ATCC 10987, complete genomeDNA-binding protein HU3e-0753.9
NC_011773:3547507:356972435697243569996273Bacillus cereus AH820 chromosome, complete genomeDNA-binding protein HU3e-0753.9
NC_007086:1988000:199247519924751992774300Xanthomonas campestris pv. campestris str. 8004, complete genomeintegration host factor alpha subunit3e-0753.9
NC_003902:2903493:291844529184452918744300Xanthomonas campestris pv. campestris str. ATCC 33913, completeintegration host factor subunit alpha3e-0753.9
NC_017271:2906000:292097929209792921278300Xanthomonas campestris pv. raphani 756C chromosome, completeintegration host factor subunit alpha3e-0753.9
NC_009925:5957806:596688159668815967162282Acaryochloris marina MBIC11017, complete genomeDNA-binding protein HU3e-0753.9
NC_017506:1100679:110742411074241107726303Marinobacter adhaerens HP15 chromosome, complete genomeintegration host factor subunit alpha4e-0753.5
NC_007948:1574881:160283616028361603147312Polaromonas sp. JS666, complete genomehistone-like DNA-binding protein4e-0753.5
NC_012560:2348202:236469223646922364964273Azotobacter vinelandii DJ, complete genomehistone-like bacterial DNA-binding protein4e-0753.5
NC_021150:2348214:236470423647042364976273Azotobacter vinelandii CA6, complete genomehistone-like DNA-binding protein4e-0753.5
NC_007298:2856104:286766328676632867965303Dechloromonas aromatica RCB, complete genomeintegration host factor alpha subunit5e-0753.1
NC_016629:3396500:342726034272603427532273Desulfovibrio africanus str. Walvis Bay chromosome, completehistone family protein DNA-binding protein5e-0753.1
NC_021150:2026496:204104020410402041318279Azotobacter vinelandii CA6, complete genomeintegration host factor, alpha subunit5e-0753.1
NC_012560:2026483:204102720410272041305279Azotobacter vinelandii DJ, complete genomeintegration host factor, alpha subunit5e-0753.1
NC_008702:1153344:116933611693361169647312Azoarcus sp. BH72, complete genomeintegration host factor alpha-subunit5e-0753.1
NC_016148:1175999:117808711780871178362276Thermovirga lienii DSM 17291 chromosome, complete genomehistone family protein DNA-binding protein4e-0753.1
NC_004545:15650:374933749337771279Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeDNA-binding protein HU7e-0752.8
NC_015853:1:232623262664339Acidithiobacillus caldus SM-1 plasmid pLAtc2, complete sequenceintegration host factor subunit A-like protein8e-0752.4
NC_008262:2649289:270117027011702701445276Clostridium perfringens SM101, complete genomeDNA-binding protein HU8e-0752.4
NC_018868:569423:616427616427616732306Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeintegration host factor subunit alpha1e-0652
NC_013959:1723037:173986717398671740175309Sideroxydans lithotrophicus ES-1 chromosome, complete genomeintegration host factor, alpha subunit1e-0652
NC_004603:3080614:310021231002123100487276Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeDNA-binding protein HU-21e-0652
NC_011992:1234610:124592112459211246193273Acidovorax ebreus TPSY, complete genomehistone family protein DNA-binding protein2e-0651.6
NC_008782:2781229:279335227933522793624273Acidovorax sp. JS42, complete genomehistone family protein DNA-binding protein2e-0651.6
NC_002947:2589951:263308226330822633354273Pseudomonas putida KT2440, complete genomeDNA-binding protein HU-beta2e-0651.6
NC_016445:2663837:270243927024392702711273Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA-binding protein HU1e-0651.6
NC_015410:3209954:322150332215033221781279Pseudomonas mendocina NK-01 chromosome, complete genomeintegration host factor subunit alpha2e-0651.2
NC_018691:3525430:356799135679913568293303Alcanivorax dieselolei B5 chromosome, complete genomeIntegration host factor subunit alpha2e-0651.2
NC_009633:168266:184646184646184924279Alkaliphilus metalliredigens QYMF chromosome, complete genomehistone family protein DNA-binding protein2e-0651.2
NC_015571:411156:429426429426429692267Porphyromonas gingivalis TDC60, complete genomeDNA-binding protein HU3e-0650.8
NC_004757:1021355:103707810370781037386309Nitrosomonas europaea ATCC 19718, complete genomeintegration host factor alpha subunit2e-0650.8
NC_009483:3024115:304724230472423047520279Geobacter uraniireducens Rf4 chromosome, complete genomehistone family protein DNA-binding protein2e-0650.8
NC_008344:2434344:245062724506272450935309Nitrosomonas eutropha C91, complete genomeintegration host factor, alpha subunit2e-0650.8
NC_002932:296557:307146307146307451306Chlorobium tepidum TLS, complete genomeDNA-binding protein HU-alpha, putative3e-0650.4
NC_015731:867377:917125917125917433309Nitrosomonas sp. Is79A3 chromosome, complete genomeIntegration host factor subunit alpha3e-0650.4
NC_007645:4677965:469218546921854692487303Hahella chejuensis KCTC 2396, complete genomeintegration host factor, alpha subunit3e-0650.4
NC_015222:2089767:209658320965832096879297Nitrosomonas sp. AL212 chromosome, complete genomeintegration host factor, alpha subunit3e-0650.4
NC_009925:1109770:112273711227371123012276Acaryochloris marina MBIC11017, complete genomeDNA-binding protein HU3e-0650.4
NC_007298:1824335:184224018422401842512273Dechloromonas aromatica RCB, complete genomeHistone-like bacterial DNA-binding protein5e-0650.1
NC_010516:3845942:384813938481393848417279Clostridium botulinum B1 str. Okra, complete genomeDNA-binding protein HU4e-0650.1
NC_009698:3647955:365023136502313650509279Clostridium botulinum A str. Hall chromosome, complete genomeDNA-binding protein HU4e-0650.1
NC_002950:1334500:133467413346741334952279Porphyromonas gingivalis W83, complete genomeDNA-binding protein HU4e-0650.1
NC_015571:1265121:126695712669571267235279Porphyromonas gingivalis TDC60, complete genomeDNA-binding protein HU4e-0650.1
NC_007498:1666242:167333016733301673611282Pelobacter carbinolicus DSM 2380, complete genomeintegration host factor, alpha subunit4e-0650.1
NC_008609:2446246:248416824841682484461294Pelobacter propionicus DSM 2379, complete genomehistone family protein DNA-binding protein5e-0649.7
NC_010723:173280:174948174948175226279Clostridium botulinum E3 str. Alaska E43, complete genomeDNA-binding protein HU5e-0649.7