Pre_GI Gene

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Host: NC_012660 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012660:4558122 Pseudomonas fluorescens SBW25 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
455673145581251395outer membrane efflux lipoproteinQuickGO ontologyBLASTP
455812245612563135multidrug efflux proteinQuickGO ontologyBLASTP
456125945624431185putative acriflavine resistance protein AQuickGO ontologyBLASTP
456258845639731386two-component system sensor kinaseQuickGO ontologyBLASTP
45639774564660684two-component system response regulatorQuickGO ontologyBLASTP
45651764565427252hypothetical protein
45658404565956117hypothetical protein
456624045679311692putative methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
45680204568520501hypothetical proteinBLASTP
45694864570073588hypothetical protein
45700404570822783hypothetical proteinBLASTP
45708244571291468hypothetical proteinBLASTP
45714384571911474hypothetical proteinBLASTP
45718534572362510hypothetical proteinBLASTP
45726384572946309hypothetical protein
45730824573384303hypothetical protein
45738954574146252hypothetical proteinBLASTP
45747404575021282putative phage excisionaseQuickGO ontologyBLASTP
45764154576948534putative phage encoded lysozymeQuickGO ontologyBLASTP
457704945790371989putative lipopolysaccharide modification acyltransferaseQuickGO ontologyBLASTP
45810134581612600hypothetical proteinBLASTP
45824904582987498hypothetical proteinBLASTP
45831634583501339phage proteinQuickGO ontologyBLASTP
4584206458427974tRNA-ProQuickGO ontology
45843704584726357MerR family transcriptional regulatorQuickGO ontologyBLASTP
45847074585009303integration host factor subunit alphaQuickGO ontologyBLASTP
458501345873912379phenylalanyl-tRNA synthetase subunit betaQuickGO ontologyBLASTP
458741845884341017phenylalanyl-tRNA synthetase subunit alphaQuickGO ontologyBLASTP
4588544458890035750S ribosomal protein L20QuickGO ontologyBLASTP
4588931458912519550S ribosomal protein L35QuickGO ontologyBLASTP
45891864589737552translation initiation factor IF-3QuickGO ontologyBLASTP
458973745916591923threonyl-tRNA synthetaseQuickGO ontologyBLASTP
45920274592341315hypothetical proteinBLASTP