Pre_GI: BLASTP Hits

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Query: NC_009800:1589000:1609488 Escherichia coli HS, complete genome

Start: 1609488, End: 1614908, Length: 5421

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016902:2395578:2395578239557824009985421Escherichia coli KO11FL chromosome, complete genomeouter membrane autotransporter barrel domain-containing protein03316
CP002516:2395578:2395578239557824009985421Escherichia coli KO11, complete genomeouter membrane autotransporter barrel domain protein03316
NC_010468:2345781:2345781234578123512015421Escherichia coli ATCC 8739, complete genomeouter membrane autotransporter barrel domain protein03305
NC_011741:1579375:1602899160289916083195421Escherichia coli IAI1 chromosome, complete genomeputative lipoprotein/autotransporter domain-containing protein03299
CU928160:1579375:1602899160289916083195421Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative exported protein03299
CP002185:1681327:1704944170494417102775334Escherichia coli W, complete genomepredicted lipoprotein03257
NC_020063:2230000:2249441224944122548615421Enterobacteriaceae bacterium strain FGI 57, complete genomeouter membrane autotransporter barrel domain-containing protein02886
NC_010473:1661000:1681758168175816857353978Escherichia coli str. K-12 substr. DH10B, complete genomepredicted lipoprotein02353
NC_000913:1570431:1592133159213315961103978Escherichia coli K12, complete genomepredicted lipoprotein02353
AC_000091:1574000:1595823159582315998003978Escherichia coli W3110 DNA, complete genomepredicted lipoprotein02353
NC_012759:1462490:1484192148419214881693978Escherichia coli BW2952 chromosome, complete genomeputative lipoprotein02353
NC_002655:1966464:1966464196646419704954032Escherichia coli O157:H7 EDL933, complete genomehypothetical protein02345
NC_012947:2228235:2230071223007122316211551Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeouter membrane autotransporter barrel domain protein01030
NC_010473:1661000:1680314168031416817141401Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein0930
AC_000091:1574000:1594379159437915957791401Escherichia coli W3110 DNA, complete genome0930
NC_000913:1570431:1590689159068915920891401Escherichia coli K12, complete genomeconserved protein, predicted pseudogene0930
NC_012759:1462490:1482748148274814841481401Escherichia coli BW2952 chromosome, complete genomehypothetical protein0930
NC_012967:1546000:1569232156923215706321401Escherichia coli B str. REL606 chromosome, complete genome0930
NC_002655:1966464:1970492197049219718921401Escherichia coli O157:H7 EDL933, complete genomeputative ATP-binding component of a transport system and adhesin protein0918
NC_010498:2555706:2556284255628425641977914Escherichia coli SMS-3-5, complete genomeouter membrane autotransporter0764
NC_015663:2807574:2829400282940028361616762Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein0687
NC_008149:3648139:36716853671685368280211118Yersinia pestis Nepal516, complete genomeautotransporter protein0665
NC_017154:848500:87203687203688315311118Yersinia pestis D106004 chromosome, complete genomeputative autotransporter protein0665
NC_017168:4509918:45280984528098453921511118Yersinia pestis A1122 chromosome, complete genomeputative autotransporter protein0665
NC_008150:3711953:37119533711953372307011118Yersinia pestis Antiqua, complete genomeputative autotransporter protein0665
NC_010465:804249:80424980424981718712939Yersinia pseudotuberculosis YPIII, complete genomeouter membrane autotransporter barrel domain protein0655
NC_009425:1:1047210472152564785Enterobacter sp. 638 plasmid pENTE01, complete sequenceouter membrane autotransporter4e-153543
NC_009425:1:787848174740Enterobacter sp. 638 plasmid pENTE01, complete sequenceouter membrane autotransporter8e-147522
NC_013716:2898434:2911789291178929146982910Citrobacter rodentium ICC168, complete genomeputative outer membrane autotransporter7e-136486
NC_014618:2788533:2800332280033228046994368Enterobacter cloacae SCF1 chromosome, complete genomeouter membrane autotransporter barrel domain-containing protein4e-134480
NC_012947:44512:5269952699561963498Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeouter membrane autotransporter barrel domain protein5e-132473
NC_012967:3769499:3788241378824137917383498Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein5e-132473
NC_016816:3333000:3357378335737833603352958Pantoea ananatis LMG 5342, complete genomeType V secretory pathway, adhesin AidA5e-129463
NC_012125:3879917:3888198388819838909212724Salmonella enterica subsp. enterica serovar Paratyphi C strainautotransported protein1e-128462
NC_010498:1995500:1999462199946220017832322Escherichia coli SMS-3-5, complete genomeautotransporter (AT) family porin7e-116419
NC_011751:1446073:1466883146688314685321650Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-114416
NC_011750:1978801:1980462198046219831102649Escherichia coli IAI39 chromosome, complete genomeputative outer membrane autotransporter barrel, putative pectin lyase fold1e-114415
NC_011740:1831845:1835772183577218385102739Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein; putative exported protein2e-114415
CU928160:1232510:1246613124661312489342322Escherichia coli IAI1 chromosome, complete genomeputative Outer membrane autotransporter barrel, putative pectin lyase fold2e-113412
NC_011741:1232510:1246613124661312489342322Escherichia coli IAI1 chromosome, complete genomeputative outer membrane autotransporter barrel pectin lyase fold2e-113412
NC_013361:1634226:1646955164695516492762322Escherichia coli O26:H11 str. 11368 chromosome, complete genomeAidA-I adhesin2e-113411
NC_013353:1339263:1353366135336613556872322Escherichia coli O103:H2 str. 12009, complete genomeAidA-I adhesin-like protein2e-113411
CP002185:1298675:1312778131277813150992322Escherichia coli W, complete genome2e-113411
AP010958:1339263:1353366135336613556872322Escherichia coli O103:H2 str. 12009 DNA, complete genomeAidA-I adhesin-like protein2e-113411
NC_011415:1273551:1287653128765312899742322Escherichia coli SE11 chromosome, complete genomeputative autotransporter1e-112409
NC_011748:1300863:1315755131575513180642310Escherichia coli 55989, complete genomeputative Outer membrane autotransporter barrel, putative pectin lyase fold2e-112408
CU928145:1300863:1315755131575513180642310Escherichia coli 55989 chromosome, complete genomeputative Outer membrane autotransporter barrel, putative pectin lyase fold2e-112408
NC_010067:2304313:2326436232643623288502415Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-110399
NC_012751:275336:2828972828972850412145Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completetype V secretory pathway, adhesin6e-109396
NC_000913:1188999:1218824121882412214452622Escherichia coli K12, complete genome1e-105386
NC_010473:1245284:1259065125906512616862622Escherichia coli str. K-12 substr. DH10B, complete genome1e-105386
NC_016863:3905875:3916060391606039189272868Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative autotransporter7e-103376
NC_011149:3863913:3879256387925638821232868Salmonella enterica subsp. enterica serovar Agona str. SL483,outer membrane autotransporter barrel domain9e-103376
NC_016860:3964000:3977717397771739805242808Salmonella enterica subsp. enterica serovar Typhimurium strputative autotransported protein1e-102375
NC_004431:2747237:2748603274860327557667164Escherichia coli CFT073, complete genomeyapH homolog5e-99363
NC_004431:2747237:274781527478152748690876Escherichia coli CFT073, complete genomeHypothetical protein ydeU3e-93344
NC_010468:2699000:2704151270415127067712621Escherichia coli ATCC 8739, complete genome7e-89330
NC_000913:1188999:1220429122042912214451017Escherichia coli K12, complete genome1e-80302
NC_009801:1296488:131199213119921312912921Escherichia coli E24377A, complete genomeporin, autotransporter (AT) family6e-79297
NC_010658:1193225:120892712089271209847921Shigella boydii CDC 3083-94, complete genome7e-78293
NC_009800:1254409:126977812697781270671894Escherichia coli HS, complete genome2e-70268
NC_013364:1477248:1514816151481615165671752Escherichia coli O111:H- str. 11128, complete genome1e-55219
NC_015224:3892972:3919019391901939219642946Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative pertactin family virulence factor/autotransporter5e-54214
NC_013364:2898964:2923885292388529276193735Escherichia coli O111:H- str. 11128, complete genomeadhesin YfaL2e-52209
NC_010658:1593137:160941416094141609809396Shigella boydii CDC 3083-94, complete genome2e-50202
NC_012751:1190206:119737711973771197901525Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completetype V secretory pathway, adhesin2e-43179
NC_015224:3892972:3923126392312639244001275Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,type V secretory pathway, adhesin AidA1e-42177
NC_009672:30000:4423644236529568721Ochrobactrum anthropi ATCC 49188 plasmid pOANT04, completeouter membrane autotransporter2e-42176
NC_009672:30000:3346233462390475586Ochrobactrum anthropi ATCC 49188 plasmid pOANT04, completeouter membrane autotransporter1e-41173
NC_013364:1477248:151671715167171517088372Escherichia coli O111:H- str. 11128, complete genome2e-28129
NC_008253:1228485:124290112429011243428528Escherichia coli 536, complete genomepart of hypothetical protein b1170 (putative autotransporter)2e-27126
NC_013517:1055854:1140013114001311430843072Sebaldella termitidis ATCC 33386, complete genomeouter membrane autotransporter barrel domain protein2e-27125
NC_004431:1443968:145971614597161460243528Escherichia coli CFT073, complete genomehypothetical protein5e-27124
NC_011742:1221416:123717112371711237698528Escherichia coli S88 chromosome, complete genomehypothetical protein5e-27124
NC_008563:1217804:123355912335591234086528Escherichia coli APEC O1, complete genomehypothetical protein5e-27124
NC_007946:1280508:129515112951511295678528Escherichia coli UTI89, complete genomehypothetical protein5e-27124
NC_011745:1287714:130223113022311302758528Escherichia coli ED1a chromosome, complete genomehypothetical protein8e-27124
NC_013119:1932402:1944264194426419490394776Brucella microti CCM 4915 chromosome 1, complete sequenceouter membrane autotransporter2e-25119
NC_004310:1923404:1935263193526319400444782Brucella suis 1330 chromosome I, complete sequenceouter membrane autotransporter2e-25119
NC_017251:1923391:1935250193525019400314782Brucella suis 1330 chromosome I, complete genomeouter membrane autotransporter2e-25119
NC_006932:1939145:1951994195199419567694776Brucella abortus biovar 1 str. 9-941 chromosome I, complete5e-25118
NC_010742:1938428:1953196195319619550551860Brucella abortus S19 chromosome 1, complete sequenceouter membrane autotransporter1e-24117
NC_016778:1216739:1222168122216812239341767Brucella canis HSK A52141 chromosome 1, complete sequenceouter membrane autotransporter2e-24116
NC_016795:456110:4615084615084635232016Brucella abortus A13334 chromosome 1, complete sequenceouter membrane autotransporter2e-24115
NC_007618:1937261:1951873195187319538882016Brucella melitensis biovar Abortus 2308 chromosome I, complete2e-24115
NC_003317:48375:5378953789579134125Brucella melitensis 16M chromosome I, complete sequenceEXTRACELLULAR SERINE PROTEASE3e-24115
NC_013892:202778:2073902073902103442955Xenorhabdus bovienii SS-2004 chromosome, complete genomeOuter membrane autotransporter1e-23113
NC_017248:1933357:1948294194829419499911698Brucella melitensis NI chromosome chromosome I, complete sequenceExtracellular serine protease4e-23112
NC_017246:1942293:1957229195722919589261698Brucella melitensis M5-90 chromosome chromosome I, completeouter membrane autotransporter barrel domain-containing protein4e-23112
NC_017244:1941974:1956910195691019586071698Brucella melitensis M28 chromosome chromosome 1, complete sequenceouter membrane autotransporter4e-23112
NC_014752:324832:3417823417823438992118Neisseria lactamica ST-640, complete genomeouter membrane autotransporter9e-22107
NC_010658:1193225:120818312081831208812630Shigella boydii CDC 3083-94, complete genome8e-1687.4
NC_017986:1042642:1048615104861510508102196Pseudomonas putida ND6 chromosome, complete genomeouter membrane autotransporter9e-1584.3
NC_009512:4287605:4290568429056842927632196Pseudomonas putida F1, complete genomeouter membrane autotransporter barrel domain1e-1484
NC_013515:1391143:1404533140453314071452613Streptobacillus moniliformis DSM 12112, complete genomeouter membrane autotransporter barrel domain protein2e-1482.8
NC_020418:603750:6244686244686269932526Morganella morganii subsp. morganii KT, complete genomePutative autotransporter2e-1482.8
NC_020418:1397112:1399989139998914027542766Morganella morganii subsp. morganii KT, complete genomehypothetical protein2e-1379.7
NC_013515:1321336:1335786133578613383772592Streptobacillus moniliformis DSM 12112, complete genomeouter membrane autotransporter barrel domain protein7e-1377.8
NC_004578:2185907:2196049219604921983582310Pseudomonas syringae pv. tomato str. DC3000, complete genomeautotransporter, putative7e-1377.8
NC_010501:1629107:1629107162910716312962190Pseudomonas putida W619, complete genomeouter membrane autotransporter barrel domain protein2e-1276.6
NC_007005:4062311:4068972406897240711012130Pseudomonas syringae pv. syringae B728a, complete genomeOuter membrane autotransporter barrel2e-1276.6
NC_013717:5726:69396939117204782Citrobacter rodentium ICC168 plasmid pCROD1, complete sequenceputative autotransporter adhesin7e-1274.7
NC_013716:4306695:436332643633264364114789Citrobacter rodentium ICC168, complete genomehypothetical protein8e-1274.3
NC_005773:3851433:3857989385798938602832295Pseudomonas syringae pv. phaseolicola 1448A, complete genomeouter membrane autotransporter3e-1172.8
NC_008783:507939:5165335165335189802448Bartonella bacilliformis KC583, complete genomeputative adhesin/invasin6e-1171.2
NC_009800:1254409:1268050126805012695701521Escherichia coli HS, complete genomehypothetical protein8e-1170.9
NC_000913:1188999:122002412200241220344321Escherichia coli K12, complete genome1e-1070.1
NC_005085:2014987:2039099203909920416722574Chromobacterium violaceum ATCC 12472, complete genomeprobable ATP-binding component of a transport system2e-0966.2
NC_013592:3263005:3266698326669832699253228Dickeya dadantii Ech586, complete genomeouter membrane autotransporter barrel domain protein7e-0964.7
NC_008149:1195614:1204062120406212059781917Yersinia pestis Nepal516, complete genomeputative autotransporter protein3e-0862.8
NC_004088:1265730:1274178127417812760941917Yersinia pestis KIM, complete genomeautotransporter3e-0862.8
NC_005810:1230976:1238299123829912402151917Yersinia pestis biovar Microtus str. 91001, complete genomeputaive autotransporter protein3e-0862.8
NC_008150:2822689:2831336283133628332521917Yersinia pestis Antiqua, complete genomeputaive autotransporter protein3e-0862.8
NC_003143:3115933:3125064312506431269801917Yersinia pestis CO92, complete genomeputaive autotransporter protein3e-0862.8
NC_014029:3245778:3254226325422632561421917Yersinia pestis Z176003 chromosome, complete genomeputative autotransporter protein3e-0862.8
NC_017154:3188795:3197243319724331991591917Yersinia pestis D106004 chromosome, complete genomeputative autotransporter protein3e-0862.8
NC_017168:2626996:2635444263544426373601917Yersinia pestis A1122 chromosome, complete genomeputative autotransporter protein3e-0862.8
NC_020300:583874:5885645885645910982535Bartonella australis Aust/NH1, complete genomepertactin family virulence factor/autotransporter5e-0861.6
NC_002927:960369:9840319840319882484218Bordetella bronchiseptica RB50, complete genomeautotransporter7e-0861.2
NC_015259:485015:5507325507325522041473Polymorphum gilvum SL003B-26A1 chromosome, complete genomeSerine protease, subtilase family7e-0861.2
NC_013716:357928:3935643935643963772814Citrobacter rodentium ICC168, complete genomeputative adhesin autotransporter9e-0860.8
NC_008783:507939:5194175194175218192403Bartonella bacilliformis KC583, complete genomeputative adhesin/invasin8e-0757.8
NC_020300:583874:5963135963136012954983Bartonella australis Aust/NH1, complete genomeputative pertactin family virulence factor/autotransporter4e-0655.5
NC_020418:116500:1173911173911202552865Morganella morganii subsp. morganii KT, complete genomePutative adhesion and penetration protein7e-0654.7