Pre_GI Gene

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Host: NC_012125 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012125:3879917 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
387991738816261710hypothetical proteinBLASTP
388405938854411383transporterQuickGO ontologyBLASTP
3885729388581991tRNA-SecQuickGO ontologyBLASTP
38865793886737159transposaseQuickGO ontologyBLASTP
38874463888063618hypothetical proteinBLASTP
388819838909212724autotransported proteinQuickGO ontologyBLASTP
38910163891480465hypothetical proteinBLASTP
38914913892279789transcriptional regulatorQuickGO ontologyBLASTP
38924013892514114cytoplasmic proteinQuickGO ontologyBLASTP
38929533893078126hypothetical proteinBLASTP
38931933893762570hypothetical proteinBLASTP
38939913894518528hypothetical proteinBLASTP
389478538975112727Magnesium transport ATPase P-type 2QuickGO ontologyBLASTP
38977313898408678hypothetical proteinBLASTP
38988903899837948hypothetical proteinBLASTP
38998803900809930hypothetical proteinBLASTP
39010453901788744hypothetical proteinBLASTP
390177539028841110transferaseQuickGO ontologyBLASTP