Pre_GI Gene

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Host: NC_011748 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011748:1300863 Escherichia coli 55989, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from the diarrheagenic stools of an HIV-positive adult suffering from persistent watery diarrhea in Central African Republic. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
130086313022331371adenylosuccinate lyaseQuickGO ontologyBLASTP
13022371302878642hypothetical proteinBLASTP
130291413040201107tRNA-specific 2-thiouridylase MnmAQuickGO ontologyBLASTP
13040741304535462bifunctional thiamin pyrimidine pyrophosphate hydrolase and thiamin pyrophosphate hydrolaseQuickGO ontologyBLASTP
1304545130519865423S rRNA pseudouridine synthase EQuickGO ontologyBLASTP
130537013066201251isocitrate dehydrogenaseQuickGO ontologyBLASTP
13067231307046324hypothetical proteinBLASTP
13077421308146405hypothetical proteinBLASTP
13083671309098732putative DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
130930313105141212putative cyclic-di-GMP phosphodiesterase blue-light sensing protein using FAD BLUFQuickGO ontologyBLASTP
13108281311064237hypothetical proteinBLASTP
13111071311379273hypothetical proteinBLASTP
13114081311674267hypothetical proteinBLASTP
13117871312035249hypothetical proteinBLASTP
131236713138901524conserved hypothetical protein putative inner membrane proteinQuickGO ontologyBLASTP
13140221314240219hypothetical proteinBLASTP
13146401314849210conserved hypothetical protein putative exported proteinQuickGO ontologyBLASTP
13150561315331276IS1 repressor protein InsAQuickGO ontologyBLASTP
13152501315753504IS1 transposase InsABQuickGO ontologyBLASTP
131575513180642310putative Outer membrane autotransporter barrel putative pectin lyase foldQuickGO ontologyBLASTP
13181211318450330hypothetical proteinBLASTP
13184601318735276hypothetical protein
13192811319724444hypothetical proteinBLASTP
13200961320362267cell division topological specificity factor MinEQuickGO ontologyBLASTP
13203661321178813cell division inhibitor MinDQuickGO ontologyBLASTP
13212021321897696septum formation inhibitorQuickGO ontologyBLASTP
13224171322785369hypothetical proteinBLASTP
13229051323306402hypothetical proteinBLASTP