Pre_GI Gene

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Host: NC_009512 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009512:4287605 Pseudomonas putida F1, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
42876054288231627Fimbrial protein-like proteinQuickGO ontologyBLASTP
42882874289024738pili assembly chaperoneQuickGO ontologyBLASTP
428903942904961458hypothetical proteinBLASTP
429056842927632196outer membrane autotransporter barrel domainQuickGO ontologyBLASTP
429292442949332010hypothetical proteinBLASTP
429523442990793846YD repeat-containing proteinQuickGO ontologyBLASTP
429913543019662832hypothetical proteinBLASTP
430196943044042436hypothetical proteinBLASTP
430457843063861809hypothetical proteinBLASTP
43067444307151408hypothetical protein
430715643123275172YD repeat proteinQuickGO ontologyBLASTP
431259843151712574fimbrial biogenesis outer membrane usher proteinQuickGO ontologyBLASTP
431517143162591089Fimbrial protein-like proteinQuickGO ontologyBLASTP
4316361431643676tRNA-GlyQuickGO ontology
4316522431659776tRNA-GlyQuickGO ontology
4316769431684476tRNA-GlyQuickGO ontology
43171814318023843hypothetical proteinBLASTP
43180994318581483GAF domain-containing protein-like proteinQuickGO ontologyBLASTP
43185824319469888protein of unknown function DUF815QuickGO ontologyBLASTP
431967443220312358histidine kinaseQuickGO ontologyBLASTP
43220214322509489Glutathione peroxidaseQuickGO ontologyBLASTP