Pre_GI Gene

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Host: NC_013717 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013717:5726 Citrobacter rodentium ICC168 plasmid pCROD1, complete sequence

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
572669551230putative adhesin glycosyltransferaseQuickGO ontologyBLASTP
6939117204782putative autotransporter adhesinQuickGO ontologyBLASTP
1186712022156hypothetical protein
1229512495201hypothetical protein
1359413917324putative fimbrial regulatory proteinQuickGO ontology
1404514563519putative fimbrial proteinQuickGO ontologyBLASTP
14648170532406fimbrial outer membrane usher proteinQuickGO ontologyBLASTP
1704617738693putative fimbrial chaperoneQuickGO ontologyBLASTP
1772518243519putative fimbrial proteinQuickGO ontology
1825118820570hypothetical protein
1894519904960hypothetical protein
2000220844843hypothetical proteinBLASTP
2110121694594aluminium inducible proteinQuickGO ontologyBLASTP
22328262543927putative serine protease autotransporterQuickGO ontologyBLASTP
2705827339282putative DNA binding proteinQuickGO ontologyBLASTP
27957305362580fimbrial outer membrane usher proteinQuickGO ontologyBLASTP