Pre_GI Gene

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Host: NC_012947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012947:2228235 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
222823522292571023sugar ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
223007122316211551outer membrane autotransporter barrel domain proteinQuickGO ontologyBLASTP
2231649223174799hypothetical protein
22318442232110267DNA-binding transcriptional regulator HipBQuickGO ontologyBLASTP
223211022334321323HipA N-terminal domain proteinQuickGO ontologyBLASTP
22338042234286483fimbrial proteinQuickGO ontologyBLASTP
22380632238593531fimbrial proteinQuickGO ontologyBLASTP
22386062239109504fimbrial proteinQuickGO ontologyBLASTP
22391682240082915FimH mannose-binding domain proteinQuickGO ontologyBLASTP
224041622426952280oxidoreductaseQuickGO ontologyBLASTP
22429432243140198hypothetical proteinBLASTP
22432152243976762transcriptional regulator YdeOQuickGO ontologyBLASTP
224437822460601683sulfataseQuickGO ontologyBLASTP
224611222472691158radical SAM proteinQuickGO ontologyBLASTP