Pre_GI: BLASTN Hits

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Query: NC_021182:2422226 Clostridium pasteurianum BC1, complete genome

Start: 2422226, End: 2447353, Length: 25128

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008593:1461771*1461771148498223212Clostridium novyi NT, complete genome3e-86327BLASTN svgBLASTP svg
NC_015687:1811573*1811573183463823066Clostridium acetobutylicum DSM 1731 chromosome, complete genome7e-78299BLASTN svgBLASTP svg
NC_003030:1811820*1811820183505323234Clostridium acetobutylicum ATCC 824, complete genome7e-78299BLASTN svgBLASTP svg
NC_014328:1307490*1307490133121623727Clostridium ljungdahlii ATCC 49587 chromosome, complete genome6e-63250BLASTN svgBLASTP svg
NC_003366:2057656*2057656208209924444Clostridium perfringens str. 13, complete genome2e-62248BLASTN svgBLASTP svg
NC_021182:4602683*4602683462770125019Clostridium pasteurianum BC1, complete genome1e-57232BLASTN svgBLASTP svg
NC_008262:1950205*1950205196967819474Clostridium perfringens SM101, complete genome1e-57232BLASTN svgBLASTP svg
NC_021182:30041530041531873118317Clostridium pasteurianum BC1, complete genome3e-37165BLASTN svgBLASTP svg
NC_021182:43435143435145489320543Clostridium pasteurianum BC1, complete genome3e-31145BLASTN svgBLASTP svg
NC_021182:3525523*3525523356673741215Clostridium pasteurianum BC1, complete genome4e-30141BLASTN svgBLASTP svg
NC_021182:10095261009526103309923574Clostridium pasteurianum BC1, complete genome2e-25125BLASTN svgBLASTP svg
NC_010520:28074292807429283431926891Clostridium botulinum A3 str. Loch Maree, complete genome4e-24121BLASTN svgBLASTP svg
NC_021182:93000*9300014465551656Clostridium pasteurianum BC1, complete genome1e-23119BLASTN svgBLASTP svg
NC_021182:162236*16223618461322378Clostridium pasteurianum BC1, complete genome6e-23117BLASTN svgBLASTP svg
NC_021182:2667408*2667408269011022703Clostridium pasteurianum BC1, complete genome2e-22115BLASTN svgBLASTP svg
NC_021182:48824944882494490859926106Clostridium pasteurianum BC1, complete genome4e-21111BLASTN svgBLASTP svg
NC_021182:10452181045218106369618479Clostridium pasteurianum BC1, complete genome1e-20109BLASTN svgBLASTP svg
NC_021182:17617891761789178207920291Clostridium pasteurianum BC1, complete genome6e-20107BLASTN svgBLASTP svg
NC_021182:19834561983456200518921734Clostridium pasteurianum BC1, complete genome6e-20107BLASTN svgBLASTP svg
NC_021182:20135002013500203160018101Clostridium pasteurianum BC1, complete genome6e-20107BLASTN svgBLASTP svg
NC_012563:2761570*2761570280230240733Clostridium botulinum A2 str. Kyoto, complete genome9e-19103BLASTN svgBLASTP svg
NC_010723:10143341014334103372419391Clostridium botulinum E3 str. Alaska E43, complete genome9e-19103BLASTN svgBLASTP svg
NC_021182:40112940112942526224134Clostridium pasteurianum BC1, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_020291:48158534815853483840422552Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome5e-1797.6BLASTN svgBLASTP svg
NC_012563:29791472979147300249023344Clostridium botulinum A2 str. Kyoto, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_007205:424500*42450044975125252Candidatus Pelagibacter ubique HTCC1062, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010520:21715842171584219449022907Clostridium botulinum A3 str. Loch Maree, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014328:3682000*3682000370562423625Clostridium ljungdahlii ATCC 49587 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_019978:1816940*1816940184397027031Halobacteroides halobius DSM 5150, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_003366:64908*6490811367548768Clostridium perfringens str. 13, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_021182:40880004088000411160223603Clostridium pasteurianum BC1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010520:14279811427981145070222722Clostridium botulinum A3 str. Loch Maree, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010520:15860001586000160832222323Clostridium botulinum A3 str. Loch Maree, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_014328:10469581046958106876321806Clostridium ljungdahlii ATCC 49587 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_021182:14735351473535149659923065Clostridium pasteurianum BC1, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_021182:40588734058873407780118929Clostridium pasteurianum BC1, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_021182:43109004310900433018019281Clostridium pasteurianum BC1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_021182:2360500*2360500238564325144Clostridium pasteurianum BC1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014654:59258259258261582123240Halanaerobium sp. 'sapolanicus' chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008817:1476473*1476473152252446052Prochlorococcus marinus str. MIT 9515, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_019978:14777241477724150009922376Halobacteroides halobius DSM 5150, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_021182:12456921245692126370418013Clostridium pasteurianum BC1, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_010520:2635750*2635750265654120792Clostridium botulinum A3 str. Loch Maree, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010520:11460001146000116884922850Clostridium botulinum A3 str. Loch Maree, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004193:3215500*3215500323352618027Oceanobacillus iheyensis HTE831, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_021182:35768153576815360061123797Clostridium pasteurianum BC1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_021182:4427468*4427468445021222745Clostridium pasteurianum BC1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009091:1423677*1423677146966745991Prochlorococcus marinus str. MIT 9301, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_021182:96683996683998495918121Clostridium pasteurianum BC1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011653:1616423*1616423164434727925Thermosipho africanus TCF52B, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_021182:11880001188000121083922840Clostridium pasteurianum BC1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_021182:37715233771523379409922577Clostridium pasteurianum BC1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003454:677699*67769970224424546Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete2e-0765.9BLASTN svgBLASTP svg
NC_006322:567987*56798759617928193Bacillus licheniformis ATCC 14580, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006510:14464901446490147285226363Geobacillus kaustophilus HTA426, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009725:496443*49644354991253470Bacillus amyloliquefaciens FZB42, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011184:2369662*2369662239577126110Vibrio fischeri MJ11 chromosome I, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_014551:483773*48377350659922827Bacillus amyloliquefaciens DSM 7, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006270:568171*56817159638928219Bacillus licheniformis ATCC 14580, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_019842:484933*48493354277857846Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_021182:2059143*2059143208239023248Clostridium pasteurianum BC1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021182:380500*38050040092720428Clostridium pasteurianum BC1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004193:375416*375416683449308034Oceanobacillus iheyensis HTE831, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020291:6216000*6216000625247336474Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007413:1570000*1570000159209922100Anabaena variabilis ATCC 29413, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008312:72345672345674509921644Trichodesmium erythraeum IMS101, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008593:22818962281896230590024005Clostridium novyi NT, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012440:585568*58556861010524538Persephonella marina EX-H1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014657:1193985*1193985121535121367Caldicellulosiruptor owensensis OL chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_019903:2578966*2578966260226523300Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,3e-0661.9BLASTN svgBLASTP svg
NC_003272:5184000*5184000520609922100Nostoc sp. PCC 7120, complete genome3e-0661.9BLASTN svgBLASTP svg