Pre_GI Gene

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Host: NC_003454 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003454:677699 Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete

Host Lineage: Fusobacterium nucleatum; Fusobacterium; Fusobacteriaceae; Fusobacteriales; Fusobacteria; Bacteria

General Information: Normal oral and gastrointestinal bacterium. This genus contains mostly obligately anaerobic bacilli. Many of the isolates are spindle-shaped, or fusiform. This organism belongs to the normal microflora of the human oral and gastrointestinal tracts. It is a very long and slender spindle-shaped bacillus with sharply pointed ends that is characterized by the ability to invade soft tissues. It acts as a bridge between early and late colonizers of the tooth surface, and exerts synergism with other bacteria in mixed infections. It is most frequently associated with periodontal diseases, as well as with some invasive human infections of the head and neck, chest, lung, liver and abdomen, and some anginas. One of the major amino acid and sugar fermentation pathways in Fusobacterium nucleatum produces butyric and acetic acids.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
677699678151453hypothetical proteinBLASTP
678287678589303hypothetical protein
678751679302552DNA primase bacterial type and small primase-like proteinsQuickGO ontologyBLASTP
6793146806991386asparaginyl-tRNA synthetaseQuickGO ontologyBLASTP
680709680897189hypothetical protein
6809666822191254Rod shape-determining protein rodAQuickGO ontologyBLASTP
682402682878477Hypothetical exported 24-amino acid repeat proteinQuickGO ontologyBLASTP
682841683101261Shikimate 5-dehydrogenaseQuickGO ontologyBLASTP
683152683901750Shikimate 5-dehydrogenaseQuickGO ontologyBLASTP
6838826843254443-dehydroquinate dehydrataseQuickGO ontologyBLASTP
684567685328762Exodeoxyribonuclease IIIQuickGO ontologyBLASTP
6853756861337594-nitrophenylphosphataseQuickGO ontologyBLASTP
686491686979489hypothetical protein
6871836888591677Fumarate reductase flavoprotein subunitQuickGO ontologyBLASTP
688873689019147hypothetical protein
688989689351363Arsenate reductaseQuickGO ontologyBLASTP
6894806907541275Branched-chain amino acid transport system carrier proteinQuickGO ontologyBLASTP
6909766921961221tyrosyl-tRNA synthetaseQuickGO ontologyBLASTP
692298692804507Ribosomal-protein-alanine acetyltransferaseQuickGO ontologyBLASTP
692832693311480AcetyltransferaseQuickGO ontologyBLASTP
693355693960606Endonuclease IIIQuickGO ontologyBLASTP
6940476952401194Cysteine desulfhydraseQuickGO ontologyBLASTP
695293695679387NifU proteinQuickGO ontologyBLASTP
6959146970201107D-alanyl-D-alanine carboxypeptidaseQuickGO ontologyBLASTP
6971596986491491Thermostable carboxypeptidase 1QuickGO ontologyBLASTP
698745699035291Hypothetical cytosolic proteinQuickGO ontology
699122699454333hypothetical protein
699629699982354Hypothetical cytosolic proteinQuickGO ontologyBLASTP
7000737022442172Transcription accessory protein S1 RNA binding domainQuickGO ontologyBLASTP