Pre_GI Gene

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Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:2360500 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
23607292361163435hypothetical proteinBLASTP
23611602361933774hypothetical proteinBLASTP
236227023635051236glycineserine hydroxymethyltransferaseQuickGO ontologyBLASTP
236381523672793465helicase-exonuclease AddAB AddB subunitQuickGO ontologyBLASTP
236726923712613993recombination helicase AddAQuickGO ontologyBLASTP
237137323725721200putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain proteinQuickGO ontologyBLASTP
23728192373061243hypothetical protein
23734032374119717Zn-dependent hydrolase glyoxylaseQuickGO ontologyBLASTP
23741372374709573transcriptional regulatorQuickGO ontologyBLASTP
23747662375494729Zn-dependent hydrolase glyoxylaseQuickGO ontologyBLASTP
23757242375999276hypothetical protein
23762352376390156hypothetical protein
23767062377263558acetyltransferase ribosomal protein N-acetylaseQuickGO ontologyBLASTP
23772502377438189hypothetical protein
23776762378200525deoxycytidine triphosphate deaminaseQuickGO ontologyBLASTP
23785192379355837aldoketo reductase diketogulonate reductaseQuickGO ontologyBLASTP
23795502379795246hypothetical protein
23798902380834945510-methylenetetrahydrofolate reductaseQuickGO ontology
23808182381099282acylphosphataseQuickGO ontologyBLASTP
23811132381904792thymidylate synthaseQuickGO ontologyBLASTP
23819042382407504dihydrofolate reductaseQuickGO ontologyBLASTP
238286123843211461nitrogenase molybdenum-iron protein alpha and beta chainsQuickGO ontologyBLASTP
238432123856431323nitrogenase molybdenum-iron protein alpha and beta chainsQuickGO ontologyBLASTP