Pre_GI Gene

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Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:1983456 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
198345619848321377signal transduction histidine kinaseQuickGO ontologyBLASTP
19850331985722690response regulator with CheY-like receiver domain and winged-helix DNA-binding domainQuickGO ontologyBLASTP
198574319868881146isochorismate synthase family proteinQuickGO ontologyBLASTP
1987026198867516502-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthaseQuickGO ontologyBLASTP
19888191989208390hypothetical protein
19897381990619882hydrogenase NiFe small subunit HydAQuickGO ontologyBLASTP
19910081991901894hydrogenase NiFe small subunit HydAQuickGO ontologyBLASTP
199193019933451416NiFe-hydrogenase I large subunitQuickGO ontologyBLASTP
19933481993821474hydrogenase maturation proteaseQuickGO ontologyBLASTP
19938311994172342hydrogenase nickel insertion protein HypAQuickGO ontologyBLASTP
19941761994835660hydrogenase accessory protein HypBQuickGO ontologyBLASTP
19948791995106228twin arginine-targeting protein translocase TatAE familyQuickGO ontologyBLASTP
19951201995872753Sec-independent protein secretion pathway component TatCQuickGO ontologyBLASTP
19960561996799744twin arginine targeting protein translocase subunit TatCQuickGO ontologyBLASTP
19968241997048225hydrogenase assembly chaperone HypCHupFQuickGO ontologyBLASTP
199720519982121008hydrogenase expressionformation protein HypEQuickGO ontologyBLASTP
199835020006322283NiFe hydrogenase maturation protein HypFQuickGO ontologyBLASTP
200086820019501083hydrogenase expressionformation protein HypDQuickGO ontologyBLASTP
200217620031831008high-affinity nickel-transporter HoxNHupNNixA familyQuickGO ontologyBLASTP
200337820051891812hypothetical proteinBLASTP