Pre_GI: BLASTN Hits

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Query: NC_012660:5793200 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 5793200, End: 5832609, Length: 39410

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome012670BLASTN svgBLASTP svg
NC_020209:19495001949500197652927030Pseudomonas poae RE*1-1-14, complete genome04623BLASTN svgBLASTP svg
NC_012660:26849812684981271787932899Pseudomonas fluorescens SBW25 chromosome, complete genome04621BLASTN svgBLASTP svg
NC_020209:38748443874844390437229529Pseudomonas poae RE*1-1-14, complete genome03578BLASTN svgBLASTP svg
NC_007492:85742885742888733529908Pseudomonas fluorescens PfO-1, complete genome01933BLASTN svgBLASTP svg
NC_004129:92647992647994509918621Pseudomonas fluorescens Pf-5, complete genome01834BLASTN svgBLASTP svg
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome01051BLASTN svgBLASTP svg
NC_008027:2051821*2051821207333821518Pseudomonas entomophila L48, complete genome01009BLASTN svgBLASTP svg
NC_008027:77589677589680259926704Pseudomonas entomophila L48, complete genome0854BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome0848BLASTN svgBLASTP svg
NC_002947:4484824*4484824451609931276Pseudomonas putida KT2440, complete genome0848BLASTN svgBLASTP svg
NC_012660:2045398*2045398210849663099Pseudomonas fluorescens SBW25 chromosome, complete genome0827BLASTN svgBLASTP svg
NC_010501:30000300007042840429Pseudomonas putida W619, complete genome0817BLASTN svgBLASTP svg
NC_008463:52469545246954530671059757Pseudomonas aeruginosa UCBPP-PA14, complete genome0791BLASTN svgBLASTP svg
NC_002947:61525006152500618549933000Pseudomonas putida KT2440, complete genome0785BLASTN svgBLASTP svg
NC_015379:25750002575000259943424435Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,0771BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,0771BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome0767BLASTN svgBLASTP svg
NC_010501:73436373436376909934737Pseudomonas putida W619, complete genome0712BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome0656BLASTN svgBLASTP svg
NC_015556:2265940*2265940233644770508Pseudomonas fulva 12-X chromosome, complete genome1e-148535BLASTN svgBLASTP svg
NC_005773:47972424797242481709919858Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-142515BLASTN svgBLASTP svg
NC_002947:53864895386489541416727679Pseudomonas putida KT2440, complete genome6e-138500BLASTN svgBLASTP svg
NC_012560:43504654350465437377923315Azotobacter vinelandii DJ, complete genome6e-138500BLASTN svgBLASTP svg
NC_021150:43504614350461437377523315Azotobacter vinelandii CA6, complete genome6e-138500BLASTN svgBLASTP svg
NC_007005:49927304992730502132828599Pseudomonas syringae pv. syringae B728a, complete genome4e-136494BLASTN svgBLASTP svg
NC_007005:5500196*5500196552713626941Pseudomonas syringae pv. syringae B728a, complete genome9e-128466BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome5e-123450BLASTN svgBLASTP svg
NC_004578:20738207386960648869Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-117432BLASTN svgBLASTP svg
NC_012660:4734363*4734363475525820896Pseudomonas fluorescens SBW25 chromosome, complete genome7e-116426BLASTN svgBLASTP svg
NC_007005:2686551*2686551274062754077Pseudomonas syringae pv. syringae B728a, complete genome5e-114420BLASTN svgBLASTP svg
NC_018691:28636592863659289037626718Alcanivorax dieselolei B5 chromosome, complete genome1e-61246BLASTN svgBLASTP svg
NC_002947:41675004167500424373376234Pseudomonas putida KT2440, complete genome2e-57232BLASTN svgBLASTP svg
NC_007005:98488*9848813693138444Pseudomonas syringae pv. syringae B728a, complete genome2e-48202BLASTN svgBLASTP svg
NC_015379:46303674630367466559935233Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-42182BLASTN svgBLASTP svg
NC_020209:39737639737645309955724Pseudomonas poae RE*1-1-14, complete genome4e-40174BLASTN svgBLASTP svg
NC_018691:3525430*3525430358162756198Alcanivorax dieselolei B5 chromosome, complete genome3e-35159BLASTN svgBLASTP svg
NC_018691:18227311822731185319130461Alcanivorax dieselolei B5 chromosome, complete genome3e-35159BLASTN svgBLASTP svg
NC_018691:1322389*1322389134428821900Alcanivorax dieselolei B5 chromosome, complete genome3e-35159BLASTN svgBLASTP svg
NC_004129:5723787*5723787575817934393Pseudomonas fluorescens Pf-5, complete genome1e-31147BLASTN svgBLASTP svg
NC_007005:830467*83046785407423608Pseudomonas syringae pv. syringae B728a, complete genome2e-29139BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome2e-27133BLASTN svgBLASTP svg
NC_015410:1324313*1324313135087526563Pseudomonas mendocina NK-01 chromosome, complete genome6e-24121BLASTN svgBLASTP svg
NC_010512:10155571015557104522129665Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence6e-24121BLASTN svgBLASTP svg
NC_010501:36715173671517370459933083Pseudomonas putida W619, complete genome6e-24121BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-23119BLASTN svgBLASTP svg
NC_003902:3666544*3666544374180275259Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-23119BLASTN svgBLASTP svg
NC_007606:37551553755155377834323189Shigella dysenteriae Sd197, complete genome9e-23117BLASTN svgBLASTP svg
NC_011770:49241274924127497209947973Pseudomonas aeruginosa LESB58, complete genome1e-21113BLASTN svgBLASTP svg
NC_008463:47432964743296476909925804Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-21113BLASTN svgBLASTP svg
NC_004741:3041294*3041294310468963396Shigella flexneri 2a str. 2457T, complete genome1e-21113BLASTN svgBLASTP svg
NC_004337:3049118*3049118311609966982Shigella flexneri 2a str. 301, complete genome1e-21113BLASTN svgBLASTP svg
NC_002516:89100089100091357122572Pseudomonas aeruginosa PAO1, complete genome1e-21113BLASTN svgBLASTP svg
NC_015740:45083754508375452814119767Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-18103BLASTN svgBLASTP svg
NC_012857:10974001097400112349826099Ralstonia pickettii 12D chromosome 2, complete genome1e-18103BLASTN svgBLASTP svg
NC_011992:1234610*1234610125759922990Acidovorax ebreus TPSY, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_015458:2614108*2614108264388729780Pusillimonas sp. T7-7 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
AP010958:36695003669500372827458775Escherichia coli O103:H2 str. 12009 DNA, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_002947:737924*73792476633928416Pseudomonas putida KT2440, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_014910:1591003*1591003161459423592Alicycliphilus denitrificans BC chromosome, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_014910:19125521912552193924626695Alicycliphilus denitrificans BC chromosome, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_015422:28582282858228292680368576Alicycliphilus denitrificans K601 chromosome, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_015422:3184823*3184823320638321561Alicycliphilus denitrificans K601 chromosome, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_004431:35131473513147354268029534Escherichia coli CFT073, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_020260:88230788230791401031704Cronobacter sakazakii Sp291, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015379:2417312*2417312246459947288Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-1283.8BLASTN svgBLASTP svg
NC_009649:16907169074359926693Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,1e-1283.8BLASTN svgBLASTP svg
NC_007908:33639023363902338735723456Rhodoferax ferrireducens T118, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_007908:12521891252189127831426126Rhodoferax ferrireducens T118, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_004578:63347356334735636397929245Pseudomonas syringae pv. tomato str. DC3000, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_014153:30843563084356310630321948Thiomonas intermedia K12 chromosome, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_020209:19865031986503202425537753Pseudomonas poae RE*1-1-14, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_005773:32535753253575328174728173Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_014541:29785002978500299617417675Ferrimonas balearica DSM 9799 chromosome, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_011958:976500976500101879142292Rhodobacter sphaeroides KD131 chromosome 2, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007912:3466966*3466966348462717662Saccharophagus degradans 2-40, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007005:45158534515853454582229970Pseudomonas syringae pv. syringae B728a, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_015733:26583372658337270338145045Pseudomonas putida S16 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_008577:41833614183361420632622966Shewanella sp. ANA-3 chromosome 1, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_003296:67379067379072609952310Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete8e-0867.9BLASTN svgBLASTP svg
NC_004578:32416183241618326508823471Pseudomonas syringae pv. tomato str. DC3000, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_008739:41793417936534823556Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequence8e-0867.9BLASTN svgBLASTP svg
NC_008740:443274*44327451891675643Marinobacter aquaeolei VT8, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_009348:2631759*2631759265138819630Aeromonas salmonicida subsp. salmonicida A449, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_009446:17495117495122026945319Dichelobacter nodosus VCS1703A, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_010814:90319990319992459921401Geobacter lovleyi SZ, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_012792:70786470786472612718264Variovorax paradoxus S110 chromosome 2, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_015424:1603000*1603000163382230823Aeromonas veronii B565 chromosome, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_007951:22336762233676225569422019Burkholderia xenovorans LB400 chromosome 1, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_007645:35811143581114360707925966Hahella chejuensis KCTC 2396, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_007644:20998782099878212213022253Moorella thermoacetica ATCC 39073, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_006348:2738425*2738425276209923675Burkholderia mallei ATCC 23344 chromosome 1, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_004547:91355391355395334239790Erwinia carotovora subsp. atroseptica SCRI1043, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_007951:74050074050076287822379Burkholderia xenovorans LB400 chromosome 1, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_007952:1293024*1293024131920626183Burkholderia xenovorans LB400 chromosome 2, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_008740:3602367*3602367362072718361Marinobacter aquaeolei VT8, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008826:842188421810609921882Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_012724:26821542682154271559933446Burkholderia glumae BGR1 chromosome 1, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015224:35875003587500361767930180Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-0765.9BLASTN svgBLASTP svg
NC_020209:45495634549563457659927037Pseudomonas poae RE*1-1-14, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_004578:39211993921199394421523017Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008321:39644143964414398859924186Shewanella sp. MR-4, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008322:72261272261274059917988Shewanella sp. MR-7, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008577:14896431489643151651426872Shewanella sp. ANA-3 chromosome 1, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_009434:60876560876568209973335Pseudomonas stutzeri A1501, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011769:2294387*2294387231565121265Desulfovibrio vulgaris str. 'Miyazaki F', complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015458:33289053328905335692528021Pusillimonas sp. T7-7 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_004129:4596040*4596040462128225243Pseudomonas fluorescens Pf-5, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_009092:43376174337617437380536189Shewanella loihica PV-4, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_009439:860571*86057188549124921Pseudomonas mendocina ymp, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_009454:2663539*2663539269835134813Pelotomaculum thermopropionicum SI, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_010501:25118872511887254627834392Pseudomonas putida W619, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_012660:1579204*1579204162109241889Pseudomonas fluorescens SBW25 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_012779:36527373652737367609923363Edwardsiella ictaluri 93-146, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_013440:62586762586765122625360Haliangium ochraceum DSM 14365, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_014844:442380*44238048618443805Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_015410:2505168*2505168253404528878Pseudomonas mendocina NK-01 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_015458:2998000*2998000302249324494Pusillimonas sp. T7-7 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_015578:10385881038588106779529208Treponema primitia ZAS-2 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_015675:30468523046852307978032929Mesorhizobium opportunistum WSM2075 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_002505:514732*51473255228437553Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete5e-0661.9BLASTN svgBLASTP svg