Pre_GI Gene

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Host: NC_010501 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010501:2511887 Pseudomonas putida W619, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
251040925118901482Aldehyde Dehydrogenase_QuickGO ontologyBLASTP
25118872512720834alphabeta hydrolase foldQuickGO ontologyBLASTP
25127892513385597protein of unknown function DUF1185QuickGO ontologyBLASTP
251363125146741044luciferase family proteinQuickGO ontologyBLASTP
25147412515226486flavin reductase domain protein FMN-bindingQuickGO ontologyBLASTP
251554325169461404permease for cytosinepurines uracil thiamine allantoinQuickGO ontologyBLASTP
251704125186661626methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
251889125200901200FAD-dependent pyridine nucleotide-disulphide oxidoreductaseQuickGO ontologyBLASTP
252045825230162559hypothetical proteinBLASTP
25229972523944948hypothetical proteinBLASTP
252403825259181881Integrase catalytic regionQuickGO ontologyBLASTP
25259152526475561hypothetical protein
25269832527234252hypothetical proteinBLASTP
25274142528115702hypothetical protein
252913125302791149hypothetical protein
25314692531789321hypothetical proteinBLASTP
25318512532039189hypothetical proteinBLASTP
25324702532862393hypothetical proteinBLASTP
25332332534207975TnpT proteinQuickGO ontologyBLASTP
25343532535288936integrase family proteinQuickGO ontologyBLASTP
253569325378552163hypothetical proteinBLASTP
25378522538532681hypothetical proteinBLASTP
253907725410321956adenine-specific DNA methylase containing a Zn-ribbon-like proteinQuickGO ontologyBLASTP
254106325452744212AAA ATPaseQuickGO ontologyBLASTP
25453372546278942hypothetical proteinBLASTP