Pre_GI Gene

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Host: NC_012660 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012660:1737423 Pseudomonas fluorescens SBW25 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
173742317384331011tRNA-dihydrouridine synthase AQuickGO ontologyBLASTP
173853717396881152putative phage integraseQuickGO ontologyBLASTP
17397621740658897putative phage capsid-like proteinQuickGO ontologyBLASTP
17407041741582879putative capsid scafolding proteinQuickGO ontologyBLASTP
174173417434911758terminase ATPase subunitQuickGO ontologyBLASTP
174349117445431053presumed portal vertex proteinQuickGO ontologyBLASTP
17446801745666987hypothetical protein
17456631746196534hypothetical protein
17464121747092681hypothetical proteinBLASTP
17471171747635519hypothetical proteinBLASTP
17484921748782291hypothetical protein
174898917503711383hypothetical proteinBLASTP
17506011750849249hypothetical proteinBLASTP
175125817523131056hypothetical proteinBLASTP
17537201753944225hypothetical protein
17543921755048657hypothetical protein
175524217564291188putative transporter-like membrane proteinQuickGO ontologyBLASTP
175658617594082823putative two-component system sensor kinaseQuickGO ontologyBLASTP
175940517606041200putative two-component system EAL domain response regulatorQuickGO ontologyBLASTP
176067317636422970putative two-component system sensor kinaseQuickGO ontologyBLASTP
17636421764289648putative two-component system LuxR family response regulatorQuickGO ontologyBLASTP
17642901764784495putative fimbrial-like proteinQuickGO ontology
17647811765248468putative fimbrial-like proteinQuickGO ontologyBLASTP
17652591766164906putative fimbrial-like proteinQuickGO ontology