Pre_GI Gene

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Host: NC_007951 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007951:2233676 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22336762234383708Putative dimethylmenaquinone methyltransferaseQuickGO ontologyBLASTP
223438922355791191Putative L-lactate dehydrogenaseQuickGO ontologyBLASTP
223562622369841359hypothetical proteinBLASTP
22369812237310330hypothetical proteinBLASTP
22373072237543237hypothetical protein
22381162238769654Putative glutathione S-transferaseQuickGO ontologyBLASTP
22390192239717699hypothetical proteinBLASTP
22398192240118300hypothetical protein
22401732240634462hypothetical protein
22406462241308663hypothetical proteinBLASTP
22413592241745387hypothetical proteinBLASTP
22417422242080339Transposase ISPpu14 orf2 like IS66 familyQuickGO ontologyBLASTP
224210222437241623Transposase ISPpu14 orf3 like IS66 familyQuickGO ontologyBLASTP
22437762244249474hypothetical protein
22445062245087582Putative o-acyltransferase CysELacALpxANodL familyQuickGO ontologyBLASTP
22452842245571288hypothetical protein
22456952246426732hypothetical protein
22465162246866351hypothetical protein
22469392247205267Transcriptional Regulator XRE familyQuickGO ontologyBLASTP
22472352247873639hypothetical proteinBLASTP
22478762248184309hypothetical proteinBLASTP
22489032249211309hypothetical protein
22494052249716312hypothetical protein
224980922513531545methyl-accepting chemotaxis sensory transducer PasPac sensorQuickGO ontologyBLASTP
22514772251776300Putative insertion element transposaseQuickGO ontologyBLASTP
22518782252219342hypothetical protein
22529402253398459Predicted transcriptional regulator XRE familyQuickGO ontologyBLASTP
22535752254237663hypothetical protein
225446822556941227hypothetical protein