Pre_GI Gene

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Host: NC_015410 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015410:1324313 Pseudomonas mendocina NK-01 chromosome, complete genome

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
132431313257671455oprM RS05459QuickGO ontologyBLASTP
132577013272781509major facilitator superfamily transporterQuickGO ontologyBLASTP
132731313297332421TonB-dependent siderophore receptor proteinQuickGO ontologyBLASTP
13298281330793966putative transmembrane sensorQuickGO ontologyBLASTP
13308021331320519ECF subfamily RNA polymerase sigma-24 factorQuickGO ontologyBLASTP
13316441332582939putative integraseQuickGO ontologyBLASTP
13366861336853168hypothetical proteinBLASTP
13368501337014165phage regulatory proteinQuickGO ontologyBLASTP
13370111337223213hypothetical proteinBLASTP
13371951337614420hypothetical proteinBLASTP
13377021337938237hypothetical protein
133816713394141248hypothetical proteinBLASTP
133941113404391029phage integrase family proteinQuickGO ontologyBLASTP
134096513438802916multi-sensor hybrid histidine kinaseQuickGO ontologyBLASTP
13438951344140246hypothetical proteinBLASTP
13443201344883564hypothetical proteinBLASTP
134495013467821833hypothetical proteinBLASTP
13469471347291345TraRDksA family transcriptional regulatorQuickGO ontology
13472611348241981CBS domain-containing proteinQuickGO ontologyBLASTP
134839213508752484ATP-dependent protease-like proteinQuickGO ontologyBLASTP