Pre_GI: BLASTP Hits

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Query: NC_014328:180482:184820 Clostridium ljungdahlii ATCC 49587 chromosome, complete genome

Start: 184820, End: 186631, Length: 1812

Host Lineage: Clostridium ljungdahlii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from chicken yard waste and is studied for its ability to produce ethanol. This acetogenic species has the ability to convert carbon monoxide into ethanol. The yield of this process has been increased substantially in the laboratory by using a dual-fermentation system. A methanogenic conversion step has also been designed for utilizing some of the waste products generated during the synthetic process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015520:3060495:306407430640743064778705Mahella australiensis 50-1 BON chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase7e-31135
NC_016077:998741:105235210523521053323972Acidaminococcus intestini RyC-MR95 chromosome, complete genometranscriptional regulator5e-28126
NC_015589:1630461:163505816350581635783726Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase7e-27122
NC_015966:2337833:2358239235823923594591221Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomecell wall hydrolase/autolysin1e-26122
NC_012926:727716:7307667307667335732808Streptococcus suis BM407 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase6e-26119
NC_009442:1216355:1234262123426212373693108Streptococcus suis 05ZYH33 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase8e-26119
NC_012925:1125876:1145568114556811486753108Streptococcus suis P1/7, complete genomeN-acetylmuramoyl-L-alanine amidase8e-26119
NC_016047:2480921:248393824839382484552615Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeN-acetylmuramoyl-L-alanine amidase2e-25117
NC_007604:2213659:2213659221365922147081050Synechococcus elongatus PCC 7942, complete genomeCell wall hydrolase/autolysin2e-25117
NC_014209:1910109:191010919101091910789681Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,N-acetylmuramoyl-L-alanine amidase CwlD2e-23111
NC_019970:439969:455935455935456609675Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD3e-23110
NC_010001:4586000:459873045987304599443714Clostridium phytofermentans ISDg, complete genomecell wall hydrolase/autolysin7e-23109
NC_019978:686362:688393688393689076684Halobacteroides halobius DSM 5150, complete genomeN-acetylmuramoyl-L-alanine amidase3e-22107
NC_016584:1583685:1586858158685815880421185Desulfosporosinus orientis DSM 765 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-22107
NC_013316:120759:126866126866127618753Clostridium difficile R20291, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase4e-22106
NC_009089:117980:123166123166123870705Clostridium difficile 630, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase4e-22106
NC_007644:1293701:131535413153541316082729Moorella thermoacetica ATCC 39073, complete genomeN-acetylmuramoyl-L-alanine amidase4e-22106
NC_015555:2259500:2300952230095223023821431Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeN-acetylmuramoyl-L-alanine amidase9e-22105
NC_019970:2551607:2572748257274825741781431Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeN-acetylmuramoyl-L-alanine amidase2e-21104
NC_004557:2711702:272737227273722728097726Clostridium tetani E88, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase3e-21103
NC_008095:4669947:4670944467094446727431800Myxococcus xanthus DK 1622, complete genomeN-acetylmuramoyl-L-alanine amidase domain protein3e-21103
NC_014829:178000:178742178742179461720Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD5e-21103
NC_010424:1563033:1592155159215515944102256Candidatus Desulforudis audaxviator MP104C, complete genomeN-acetylmuramoyl-L-alanine amidase9e-21102
NC_014220:2239594:224053722405372241220684Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD7e-21102
NC_016584:233486:254592254592255323732Desulfosporosinus orientis DSM 765 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-20101
NC_019897:329945:329945329945330784840Thermobacillus composti KWC4 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD4e-20100
NC_004342:3370310:3393746339374633948371092Leptospira interrogans serovar Lai str. 56601 chromosome I,N-acetylmuramoyl-L-alanine amidase2e-1997.8
NC_011146:1998981:2017847201784720191061260Geobacter bemidjiensis Bem, complete genomecell wall hydrolase/autolysin3e-1997.4
NC_017208:108134:149586149586150299714Bacillus thuringiensis serovar chinensis CT-43 chromosome, completespore-specific N-acetylmuramoyl-L-alanine amidase1e-1895.1
NC_014171:109280:147537147537148250714Bacillus thuringiensis BMB171 chromosome, complete genomespore-specific N-acetylmuramoyl-L-alanine amidase1e-1895.1
NC_016627:2870900:2888618288861828896881071Clostridium clariflavum DSM 19732 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase4e-1893.6
NC_011837:238160:266596266596267321726Clostridium kluyveri NBRC 12016, complete genomehypothetical protein4e-1893.6
NC_010723:223935:274089274089274751663Clostridium botulinum E3 str. Alaska E43, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD4e-1893.6
NC_001263:1378605:1392928139292813940431116Deinococcus radiodurans R1 chromosome 1, complete sequenceN-acetylmuramoyl-L-alanine amidase, putative5e-1893.2
NC_010718:237962:241113241113241916804Natranaerobius thermophilus JW/NM-WN-LF, complete genomeN-acetylmuramoyl-L-alanine amidase5e-1893.2
NC_009706:238160:266605266605267321717Clostridium kluyveri DSM 555 chromosome, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase5e-1893.2
NC_014973:1941500:1960295196029519615721278Geobacter sp. M18 chromosome, complete genomecell wall hydrolase/autolysin6e-1893.2
NC_015565:287900:331818331818332537720Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completecell wall hydrolase/autolysin8e-1892.4
NC_009697:3659834:366081736608173661521705Clostridium botulinum A str. ATCC 19397 chromosome, completeN-acetylmuramoyl-L-alanine amidase8e-1892.4
NC_009698:3553365:355792635579263558630705Clostridium botulinum A str. Hall chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase9e-1892.4
NC_000964:3658000:3658149365814936596391491Bacillus subtilis subsp. subtilis str. 168, complete genomeN-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49)2e-1791.3
NC_015519:2489728:250441425044142505076663Tepidanaerobacter sp. Re1 chromosome, complete genomecell wall hydrolase/autolysin2e-1790.9
NC_014328:4387303:442589644258964426588693Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase4e-1790.5
NC_011898:851892:866523866523867272750Clostridium cellulolyticum H10, complete genomecell wall hydrolase/autolysin4e-1790.1
NC_014915:2963500:297077229707722971452681Geobacillus sp. Y412MC52 chromosome, complete genomecell wall hydrolase/autolysin5e-1789.7
NC_013411:597235:632480632480633163684Geobacillus sp. Y412MC61, complete genomecell wall hydrolase/autolysin5e-1789.7
NC_009089:1202261:1214547121454712165862040Clostridium difficile 630, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)6e-1789.7
NC_013921:1396500:140293514029351403645711Thermoanaerobacter italicus Ab9 chromosome, complete genomecell wall hydrolase/autolysin7e-1789.4
NC_013316:1081044:1093266109326610953052040Clostridium difficile R20291, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)7e-1789.4
NC_020126:2883194:288603228860322886841810Myxococcus stipitatus DSM 14675, complete genomeN-acetylmuramoyl-L-alanine amidase6e-1789.4
NC_016751:1623756:1642310164231016436831374Marinitoga piezophila KA3 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase9e-1789
NC_021184:4493440:451665445166544517340687Desulfotomaculum gibsoniae DSM 7213, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1688.6
NC_009089:1202261:1217070121707012191032034Clostridium difficile 630, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)1e-1688.6
NC_013316:1081044:1095797109579710978302034Clostridium difficile R20291, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)1e-1688.6
NC_018515:3411276:341942134194213420176756Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase2e-1687.8
NC_014371:1358615:1369373136937313707041332Prevotella melaninogenica ATCC 25845 chromosome chromosome II,N-acetylmuramoyl-L-alanine amidase3e-1687.4
NC_010723:3133302:3143492314349231457052214Clostridium botulinum E3 str. Alaska E43, complete genomesurface protein PspC3e-1687
NC_014551:157418:157418157418158131714Bacillus amyloliquefaciens DSM 7, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1585.1
NC_010723:3133302:3141134314113431431912058Clostridium botulinum E3 str. Alaska E43, complete genomesurface protein PspC3e-1584
NC_003901:2727361:2729681272968127310541374Methanosarcina mazei Go1, complete genomecell surface protein4e-1583.6
NC_011567:139598:140106140106140804699Anoxybacillus flavithermus WK1, complete genomeN-acetylmuramoyl-L-alanine amidase8e-1582.8
NC_007760:3848190:387012238701223870871750Anaeromyxobacter dehalogenans 2CP-C, complete genomeN-acetylmuramoyl-L-alanine amidase8e-1582.8
NC_008255:1344674:134540813454081346205798Cytophaga hutchinsonii ATCC 33406, complete genomeN-acetylmuramoyl-L-alanine amidase I1e-1482.4
NC_004741:2526421:252642125264212527290870Shigella flexneri 2a str. 2457T, complete genomeN-acetylmuramoyl-l-alanine amidase I2e-1481.6
NC_004337:2548288:254828825482882549157870Shigella flexneri 2a str. 301, complete genomeN-acetylmuramoyl-l-alanine amidase I2e-1481.6
NC_015144:1526669:1526669152666915279791311Weeksella virosa DSM 16922 chromosome, complete genomecell wall hydrolase/autolysin2e-1481.3
NC_014328:4249032:426661242666124267328717Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase2e-1481.3
NC_011297:1167615:1185899118589911875631665Dictyoglomus thermophilum H-6-12, complete genomecell wall hydrolase/autolysin2e-1481.3
NC_018704:176088:179814179814180518705Amphibacillus xylanus NBRC 15112, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase2e-1480.9
NC_004193:205278:209362209362210093732Oceanobacillus iheyensis HTE831, complete genomegermination specific N-acetylmuramoyl-L-alanine amidase3e-1480.9
NC_018515:4660808:466437946643794665224846Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1379
NC_018664:1573925:158825715882571589231975Clostridium acidurici 9a chromosome, complete genomeputative cell wall amidase LytH9e-1479
NC_009328:2905000:292383329238332924537705Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase9e-1479
NC_008148:2290806:2308321230832123093971077Rubrobacter xylanophilus DSM 9941, complete genomecell wall hydrolase/autolysin1e-1378.6
NC_016593:868500:8686788686788700241347Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeN-acetylmuramoyl-L-alanine amidase3e-1377.4
NC_015873:1241354:125163212516321252201570Megasphaera elsdenii DSM 20460, complete genomeN-acetylmuramoyl-L-alanine amidase CwlB3e-1377.4
NC_016077:1944000:196049419604941961051558Acidaminococcus intestini RyC-MR95 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase6e-1376.3
NC_006582:2944237:2947330294733029483461017Bacillus clausii KSM-K16, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1376.3
NC_020410:1781884:178188417818841782642759Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeSporulation-specific N-acetylmuramoyl-L-alanine amidase1e-1275.1
NC_014500:4257145:4257145425714542588211677Dickeya dadantii 3937 chromosome, complete genomeN-acetylmuramoyl-l-alanine amidase II2e-1274.7
NC_012658:2498087:249936324993632500208846Clostridium botulinum Ba4 str. 657 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase5e-1273.6
NC_008593:2457594:248488124848812485810930Clostridium novyi NT, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1272.8
NC_012563:1704345:172036117203611721119759Clostridium botulinum A2 str. Kyoto, complete genomebacteriophage endolysin7e-1272.8
NC_012563:2101449:210342221034222104180759Clostridium botulinum A2 str. Kyoto, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1272.8
NC_020291:5981006:5985561598556159878882328Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeN-acetylmuramoyl-L-alanine amidase1e-1172
NC_010001:3421710:344030134403013440876576Clostridium phytofermentans ISDg, complete genomecell wall hydrolase/autolysin1e-1171.6
NC_014363:645397:6753626753626777522391Olsenella uli DSM 7084 chromosome, complete genomecell wall hydrolase/autolysin2e-1171.6
NC_016048:2055199:206947120694712070196726Oscillibacter valericigenes Sjm18-20, complete genomeputative N-acetylmuramoyl-L-alanine amidase2e-1171.2
NC_012563:2925472:292933029293302930091762Clostridium botulinum A2 str. Kyoto, complete genomebacteriophage endolysin3e-1170.9
NC_009922:315870:3336633336633350961434Alkaliphilus oremlandii OhILAs, complete genomeSpoIID/LytB domain3e-1170.5
NC_012563:2566500:256664425666442567405762Clostridium botulinum A2 str. Kyoto, complete genomeN-acetylmuramoyl-L-alanine amidase5e-1170.1
NC_019908:1043401:104251710425171043449933Brachyspira pilosicoli P43/6/78 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase6e-1169.7
NC_011726:3205278:3209074320907432108491776Cyanothece sp. PCC 8801, complete genomecell wall hydrolase/autolysin8e-1169.3
NC_013161:3071105:3087095308709530888701776Cyanothece sp. PCC 8802, complete genomecell wall hydrolase/autolysin8e-1169.3
NC_013406:781308:801375801375802103729Paenibacillus sp. Y412MC10 chromosome, complete genomecell wall hydrolase/autolysin9e-1169.3
NC_013740:1218429:125365712536571254211555Acidaminococcus fermentans DSM 20731, complete genomecell wall hydrolase/autolysin2e-1068.6
NC_016048:1438721:147035414703541470926573Oscillibacter valericigenes Sjm18-20, complete genomeputative N-acetylmuramoyl-L-alanine amidase1e-1068.6
NC_015520:224136:247277247277247894618Mahella australiensis 50-1 BON chromosome, complete genomehypothetical protein2e-1068.2
UCMB5137:1375622:137628713762871377051765Bacillus atrophaeus UCMB-5137N-acetylmuramoyl-L-alanine amidase3e-1067.8
NC_015276:2804874:2819148281914828204761329Marinomonas mediterranea MMB-1 chromosome, complete genomecell wall hydrolase/autolysin3e-1067.4
NC_002677:3253057:3259759325975932609791221Mycobacterium leprae TN, complete genomeputative hydrolase3e-1067.4
NC_011896:3252925:3259627325962732608471221Mycobacterium leprae Br4923, complete genomeputative hydrolase3e-1067.4
NC_014652:801653:831651831651832199549Caldicellulosiruptor hydrothermalis 108 chromosome, completecell wall hydrolase/autolysin3e-1067.4
NC_012691:2614603:2614603261460326161981596Tolumonas auensis DSM 9187, complete genomeN-acetylmuramoyl-L-alanine amidase6e-1066.2
NC_008253:2965573:2978391297839129796441254Escherichia coli 536, complete genomeputative amidase6e-0963.2
NC_011742:3057444:3070072307007230713251254Escherichia coli S88 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase6e-0963.2
NC_011745:3197584:3210529321052932117821254Escherichia coli ED1a chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase6e-0963.2
NC_013361:3823347:3836293383629338375461254Escherichia coli O26:H11 str. 11368 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase6e-0963.2
NC_007907:3722500:3759012375901237609401929Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-0963.2
NC_007946:3125577:3138193313819331395361344Escherichia coli UTI89, complete genomeN-acetylmuramoyl-L-alanine amidase AmiC precursor6e-0963.2
NC_007613:2699500:2710491271049127118341344Shigella boydii Sb227, complete genomeputative amidase5e-0963.2
NC_010498:3023442:3036388303638830376411254Escherichia coli SMS-3-5, complete genomeN-acetylmuramoyl-L-alanine amidase AmiC6e-0963.2
NC_014376:1472304:152044715204471521025579Clostridium saccharolyticum WM1 chromosome, complete genomecell wall hydrolase/autolysin8e-0962.8
NC_008578:2431074:2432880243288024340161137Acidothermus cellulolyticus 11B, complete genomecell wall hydrolase/autolysin2e-0861.6
NC_017093:8757291:8758675875867587598261152Actinoplanes missouriensis 431, complete genomeputative N-acetylmuramoyl-L-alanine amidase2e-0861.6
NC_014909:86000:8711587115884791365Candidatus Blochmannia vafer str. BVAF chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase2e-0861.6
NC_017068:1852708:187490318749031875460558Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative N-acetylmuramoyl-L-alanine amidase4e-0860.1
NC_013192:232778:235867235867236577711Leptotrichia buccalis DSM 1135, complete genomecell wall hydrolase/autolysin9e-0859.3
NC_017192:1885457:189668518966851897251567Arcobacter sp. L, complete genomehypothetical protein5e-0757
NC_015275:1573916:158898315889831589735753Clostridium lentocellum DSM 5427 chromosome, complete genomecell wall hydrolase/autolysin5e-0756.6
NC_010718:2460893:247263324726332473553921Natranaerobius thermophilus JW/NM-WN-LF, complete genomecell wall hydrolase/autolysin5e-0756.6
NC_006177:324363:368087368087368941855Symbiobacterium thermophilum IAM 14863, complete genomesporulation specific N-acetylmuramoyl-L-alanine amidase5e-0756.6
NC_009633:4485869:449925844992584499935678Alkaliphilus metalliredigens QYMF chromosome, complete genomecell wall hydrolase/autolysin8e-0756.2
NC_008555:1204000:124123212412321242194963Listeria welshimeri serovar 6b str. SLCC5334, complete genomephage lysin, putative8e-0756.2
NC_015977:2631789:2648850264885026542105361Roseburia hominis A2-183 chromosome, complete genomeN-acetylmuramidase/lysin2e-0655.1
NC_015425:2690448:271900327190032719938936Clostridium botulinum BKT015925 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-0654.3
NC_010520:725312:7313507313507324891140Clostridium botulinum A3 str. Loch Maree, complete genomeputative lipoprotein3e-0653.9
NC_013517:4117666:413554441355444136290747Sebaldella termitidis ATCC 33386, complete genomecell wall hydrolase/autolysin3e-0653.9
NC_014328:1108479:1114075111407511163602286Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative surface-layer protein5e-0653.5