Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:3421710 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
342171034229301221alpha-clostripain-like proteinQuickGO ontology
342303734297236687Chromosome segregation ATPase-like proteinQuickGO ontologyBLASTP
342986334309331071glycosyl transferase family 2QuickGO ontologyBLASTP
343099434335582565glycosyl transferase group 1QuickGO ontologyBLASTP
34338033434108306hypothetical protein
34342173435191975glycosyl transferase group 1QuickGO ontologyBLASTP
343534634367191374glycosyl transferase family 2QuickGO ontologyBLASTP
34370223437582561RubrerythrinQuickGO ontologyBLASTP
34378273438198372hypothetical proteinBLASTP
343859934402151617peptidase S8 and S53 subtilisin kexin sedolisinQuickGO ontologyBLASTP
34403013440876576cell wall hydrolaseautolysinQuickGO ontologyBLASTP
34410693441824756peptidase A24A domain proteinQuickGO ontologyBLASTP
34419363442688753pyruvate formate-lyase activating enzymeQuickGO ontologyBLASTP
34430753443323249formate C-acetyltransferase glycine radicalQuickGO ontologyBLASTP
34434223443625204hypothetical proteinBLASTP
344364334457032061formate acetyltransferaseQuickGO ontologyBLASTP