Pre_GI Gene

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Host: NC_008253 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008253:2965573 Escherichia coli 536, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
296557329670031431hypothetical proteinBLASTP
29669962967400405hypothetical protein
29674752967792318hypothetical proteinBLASTP
296774929692361488hypothetical proteinBLASTP
296920029702791080hypothetical proteinBLASTP
29702602970796537hypothetical proteinBLASTP
29708002971228429hypothetical proteinBLASTP
297122829726041377hypothetical proteinBLASTP
297290429738519482-hydroxyacid dehydrogenaseQuickGO ontologyBLASTP
29739232974519597hypothetical posphosugar isomeraseQuickGO ontologyBLASTP
297452229756971176putative aminotransferaseQuickGO ontologyBLASTP
297569729772261530PTS system maltose and glucose-specific IIABC componentQuickGO ontologyBLASTP
29773092978133825putative transcriptional antiterminator proteinQuickGO ontologyBLASTP
297839129796441254putative amidaseQuickGO ontologyBLASTP
297987629812071332amino-acid acetyltransferaseQuickGO ontologyBLASTP
298128929831151827exodeoxyribonuclease V alpha chainQuickGO ontologyBLASTP
298311529866573543exodeoxyribonuclease V beta chainQuickGO ontologyBLASTP
298665029895382889protease III precursorQuickGO ontologyBLASTP