Pre_GI Gene

Some Help

Host: NC_013316 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013316:1081044 Clostridium difficile R20291, complete genome

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
108104410823001257putative glycosyl transferaseQuickGO ontologyBLASTP
108232310844042082putative cell wall anchored proteinQuickGO ontologyBLASTP
10844531085412960BLASTP
108558010867041125UDP-N-acetylglucosamine 2-epimeraseQuickGO ontologyBLASTP
10867821087756975putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidaseQuickGO ontologyBLASTP
10879081089531162416S ribosomal RNAQuickGO ontologyBLASTP
10898251092777295323S ribosomal RNAQuickGO ontologyBLASTP
109289710930131175S ribosomal RNAQuickGO ontologyBLASTP
109326610953052040cell surface protein putative N-acetylmuramoyl-L-alanine amidaseQuickGO ontologyBLASTP
109579710978302034cell surface protein putative N-acetylmuramoyl-L-alanine amidaseQuickGO ontologyBLASTP
109805810999711914hypothetical proteinBLASTP
109996411021832220putative helicaseQuickGO ontologyBLASTP
11022921103122831hypothetical proteinBLASTP
110311211065793468ATP-dependent nuclease subunit BQuickGO ontologyBLASTP
110657911104063828ATP-dependent nuclease subunit AQuickGO ontologyBLASTP