Pre_GI: BLASTP Hits

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Query: NC_012660:4149487:4169211 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 4169211, End: 4171436, Length: 2226

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:1680500:1700973170097317031052133Pseudomonas putida S16 chromosome, complete genomeacetyltransferase0662
NC_016147:1788219:1789291178929117919602670Pseudoxanthomonas spadix BD-a59 chromosome, complete genomecompetence-related DNA-transformation transporter3e-35150
NC_014394:1815638:1836295183629518386552361Gallionella capsiferriformans ES-2 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec23e-33144
NC_013016:633313:6440126440126462942283Neisseria meningitidis alpha14 chromosome, complete genomecompetence protein ComA5e-26120
NC_017515:1555500:1558623155862315609052283Neisseria meningitidis M04-240196 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec25e-26120
NC_010120:662969:6740406740406762592220Neisseria meningitidis 053442, complete genomecompetence protein5e-26120
NC_017505:721395:7354557354557377372283Neisseria meningitidis alpha710 chromosome, complete genomecompetence protein4e-26120
NC_017517:749031:7641167641167661912076Neisseria meningitidis M01-240355 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec24e-26120
NC_017501:1633436:1639389163938916414642076Neisseria meningitidis 8013, complete genomecompetence protein ComA4e-26120
NC_017514:1520245:1523329152332915254042076Neisseria meningitidis M01-240149 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec24e-26120
NC_017518:795113:8091728091728114542283Neisseria meningitidis NZ-05/33 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec24e-26120
NC_003112:719490:7325667325667346412076Neisseria meningitidis MC58, complete genomecompetence protein ComA3e-26120
NC_015519:1113095:1131445113144511337902346Tepidanaerobacter sp. Re1 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec26e-26119
NC_017512:642229:6522936522936545752283Neisseria meningitidis WUE 2594, complete genomeCompetence protein comA3e-25117
NC_003116:867943:8816518816518837262076Neisseria meningitidis Z2491, complete genomecompetence protein3e-25117
NC_016616:2997348:2999025299902530007581734Dechlorosoma suillum PS chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec22e-22108
NC_014640:4193193:4194192419419241965312340Achromobacter xylosoxidans A8 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec23e-22107
NC_016616:2997348:304372930437293044514786Dechlorosoma suillum PS chromosome, complete genome8e-22106
NC_008700:1627401:1627401162740116296982298Shewanella amazonensis SB2B, complete genomeDNA internalization-related competence protein ComEC/Rec25e-21103
NC_011186:515214:5323295323295344642136Vibrio fischeri MJ11 chromosome II, complete sequenceDNA internalization-related competence protein ComEC/Rec21e-1998.6
NC_010531:428000:438851438851439660810Polynucleobacter necessarius STIR1, complete genomeDNA internalization-related competence protein ComEC/Rec22e-1998.2
NC_017208:4294341:4314574431457443168952322Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeComE operon protein 32e-1998.2
NC_011959:1965158:198185419818541982735882Thermomicrobium roseum DSM 5159, complete genomeComE operon protein 36e-1996.7
NC_014221:591785:6059306059306083202391Truepera radiovictrix DSM 17093 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec28e-1996.3
NC_004722:4244730:4264966426496642672872322Bacillus cereus ATCC 14579, complete genomeComE operon protein 39e-1995.9
NC_011772:4255161:4275374427537442776952322Bacillus cereus G9842, complete genomeDNA internalization-related competence protein ComEC/Rec21e-1895.9
NC_014220:1732254:1732254173225417346382385Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec22e-1895.1
NC_011725:4288309:4308540430854043108612322Bacillus cereus B4264 chromosome, complete genomeDNA internalization-related competence protein ComEC/Rec22e-1895.1
NC_015425:2277570:2294149229414922953271179Clostridium botulinum BKT015925 chromosome, complete genomemetallo-beta-lactamase superfamily protein2e-1895.1
NC_018876:2189798:219092721909272191892966Methanolobus psychrophilus R15 chromosome, complete genomecompetence-like protein3e-1894.4
NC_007644:1293701:1297449129744912984951047Moorella thermoacetica ATCC 39073, complete genomeBeta-lactamase-like2e-1791.7
NC_003901:3698164:3698164369816436995791416Methanosarcina mazei Go1, complete genomecompetence-like protein4e-1790.5
NC_014958:843456:8584288584288606592232Deinococcus maricopensis DSM 21211 chromosome, complete genomeDNA internalization-like competence protein ComEC/Rec23e-1687.8
NC_015425:1295261:1327851132785113291431293Clostridium botulinum BKT015925 chromosome, complete genomemetallo beta-lactamase superfamily hydrolase2e-1585.1
NC_011837:950000:975137975137976012876Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-1585.1
NC_008593:2020473:2040892204089220422081317Clostridium novyi NT, complete genomeMetallo-beta-lactamase superfamily protein2e-1584.7
NC_009633:3055413:309597330959733096854882Alkaliphilus metalliredigens QYMF chromosome, complete genomebeta-lactamase domain-containing protein3e-1584.3
NC_021182:3409199:341020734102073411133927Clostridium pasteurianum BC1, complete genomeputative hydrolase (metallo-beta-lactamase superfamily)4e-1583.6
NC_010939:896500:9179919179919202852295Actinobacillus pleuropneumoniae serovar 7 str. AP76, completerecombination protein 26e-1583.2
NC_010718:1229355:1242334124233412445862253Natranaerobius thermophilus JW/NM-WN-LF, complete genomeDNA internalization-related competence protein ComEC/Rec25e-1480.5
NC_015555:863173:879509879509880426918Thermoanaerobacterium xylanolyticum LX-11 chromosome, completebeta-lactamase domain protein7e-1479.7
NC_018870:2316499:2317535231753523185451011Thermacetogenium phaeum DSM 12270 chromosome, complete genomebeta-lactamase-like protein1e-1379.3
NC_017098:1542284:1565132156513215661661035Spirochaeta africana DSM 8902 chromosome, complete genomeputative hydrolase2e-1378.6
NC_014721:2135500:2151860215186021529211062Caldicellulosiruptor kristjanssonii 177R1B chromosome, completehypothetical protein3e-1377.8
NC_015425:2024154:202906720290672029936870Clostridium botulinum BKT015925 chromosome, complete genomecomE-like protein, metallo beta-lactamase superfamily hydrolase5e-1377
NC_015573:893862:9200839200839212731191Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein7e-1376.3
NC_014393:3425694:343246234324623433316855Clostridium cellulovorans 743B chromosome, complete genomeComE operon protein2e-1274.7
NC_010424:697187:750359750359751183825Candidatus Desulforudis audaxviator MP104C, complete genomehypothetical protein2e-1274.7
NC_019970:1991944:199194419919441992897954Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeputative hydrolase (metallo-beta-lactamase superfamily)4e-1273.9
NC_017098:840492:842582842582843433852Spirochaeta africana DSM 8902 chromosome, complete genomeputative hydrolase5e-1273.9
NC_014328:711842:724612724612725472861Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative ComE-like protein2e-1171.6
NC_004557:558500:570458570458571333876Clostridium tetani E88, complete genomecomE operon protein3e-1171.2
NC_012658:482313:496519496519497382864Clostridium botulinum Ba4 str. 657 chromosome, complete genomemetallo-beta-lactamase family protein5e-1170.5
NC_009495:482500:494523494523495386864Clostridium botulinum A str. ATCC 3502 chromosome, complete genomemetallo beta-lactamase superfamily lipoprotein5e-1170.5
NC_010520:496500:508756508756509619864Clostridium botulinum A3 str. Loch Maree, complete genomemetallo-beta-lactamase family protein5e-1170.1
NC_017297:490922:505958505958506821864Clostridium botulinum F str. 230613 chromosome, complete genomemetallo-beta-lactamase family protein8e-1169.7
NC_009699:490652:505688505688506551864Clostridium botulinum F str. Langeland chromosome, complete genomemetallo-beta-lactamase family protein8e-1169.7
NC_008601:168063:1680631680631700782016Francisella tularensis subsp. novicida U112, complete genomecompetence protein9e-1169.3
NC_010516:514000:525978525978526841864Clostridium botulinum B1 str. Okra, complete genomemetallo-beta-lactamase family protein1e-1069.3
NC_015873:2294312:230892823089282309860933Megasphaera elsdenii DSM 20460, complete genomemetallo-beta-lactamase family protein1e-1068.9
NC_019977:2307000:2308144230814423094961353Methanomethylovorans hollandica DSM 15978, complete genomeputative hydrolase (metallo-beta-lactamase superfamily)1e-1068.9
NC_009749:1825453:1843623184362318456382016Francisella tularensis subsp. holarctica FTA, complete genomecompetence-related protein2e-1068.2
NC_007880:1830803:1848973184897318509882016Francisella tularensis subsp. holarctica, complete genomeCompetence-related protein2e-1068.2
NC_012563:519037:533717533717534580864Clostridium botulinum A2 str. Kyoto, complete genomemetallo-beta-lactamase family protein6e-1066.6
NC_020389:1730376:1737540173754017391111572Methanosarcina mazei Tuc01, complete genomehypothetical protein1e-0965.9
NC_015711:8852850:8852850885285088540461197Myxococcus fulvus HW-1 chromosome, complete genomemetallo-beta-lactamase family protein2e-0964.7
NC_009698:467500:479686479686480549864Clostridium botulinum A str. Hall chromosome, complete genomemetallo-beta-lactamase4e-0860.5
NC_009697:444801:459298459298460161864Clostridium botulinum A str. ATCC 19397 chromosome, completemetallo-beta-lactamase family protein4e-0860.5
NC_014972:2659388:2662774266277426653262553Desulfobulbus propionicus DSM 2032 chromosome, complete genomeDNA internalization-like competence protein ComEC/Rec28e-0859.7
NC_002608:268000:2835292835292849681440Halobacterium sp. NRC-1 plasmid pNRC200, complete sequenceComA1e-0758.9