Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4512640 Kineococcus radiotolerans SRS30216, complete genome

Start: 4512640, End: 4513764, Length: 1125

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008595:5168941:5172402517240251734931092Mycobacterium avium 104, complete genomeoxidoreductase, zinc-binding dehydrogenase family protein2e-94346
NC_020302:85821:9670496704978641161Corynebacterium halotolerans YIM 70093 = DSM 44683, completealcohol dehydrogenase3e-85315
NC_015458:1692401:1709745170974517108691125Pusillimonas sp. T7-7 chromosome, complete genomealcohol dehydrogenase9e-64244
NC_015564:4727630:1321913219143611143Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomeputative alcohol dehydrogenase, zinc-containing5e-62238
NC_014831:2133060:2158774215877421599071134Thermaerobacter marianensis DSM 12885 chromosome, complete genomeAlcohol dehydrogenase zinc-binding domain protein1e-60234
NC_019673:6778401:6790687679068767919011215Saccharothrix espanaensis DSM 44229 complete genomeAlcohol dehydrogenase zinc-binding domain protein4e-46185
NC_014915:2847680:2868983286898328700891107Geobacillus sp. Y412MC52 chromosome, complete genomeAlcohol dehydrogenase zinc-binding domain protein2e-34146
NC_016593:2851243:2871939287193928730451107Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completealcohol dehydrogenase3e-33142
NC_005810:1520000:1533825153382515349641140Yersinia pestis biovar Microtus str. 91001, complete genomealcohol dehydrogenase2e-29129
NC_010634:1809500:1823149182314918242881140Yersinia pseudotuberculosis PB1/+, complete genomeS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase2e-29129
NC_006155:1807902:1822940182294018240791140Yersinia pseudotuberculosis IP 32953, complete genomeprobable alcohol dehydrogenase / formaldehyde dehydrogenase (...2e-29129
NC_010159:3169266:3180918318091831820571140Yersinia pestis Angola, complete genomeS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase2e-29129
NC_010465:2820500:2823802282380228249411140Yersinia pseudotuberculosis YPIII, complete genomeS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase2e-29129
NC_009381:1655731:1660228166022816613671140Yersinia pestis Pestoides F chromosome, complete genomealcohol dehydrogenase2e-29129
NC_009708:2788855:2793354279335427944931140Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase2e-29129
NC_008800:3061484:3065971306597130671191149Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,alcohol dehydrogenase6e-29128
NC_015224:1703130:1718128171812817192821155Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,alcohol dehydrogenase7e-29128
NC_012691:3126500:3151254315125431523781125Tolumonas auensis DSM 9187, complete genomeS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase9e-29127
NC_012803:1117875:1139418113941811405121095Micrococcus luteus NCTC 2665, complete genomeZn-dependent alcohol dehydrogenase, class III1e-28127
NC_003143:1691000:1704921170492117060541134Yersinia pestis CO92, complete genomealcohol dehydrogenase3e-28126
NC_010681:121647:1236221236221247311110Burkholderia phytofirmans PsJN chromosome 1, complete sequenceS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase5e-28125
NC_010087:319063:3396013396013407101110Burkholderia multivorans ATCC 17616 chromosome 3, completeS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase4e-28125
NC_010801:550270:5841485841485852571110Burkholderia multivorans ATCC 17616 chromosome 3, completeS-(hydroxymethyl)glutathione dehydrogenase4e-28125
NC_015733:864959:8689168689168700251110Pseudomonas putida S16 chromosome, complete genomeS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase4e-28125
NC_008150:905000:9187859187859199241140Yersinia pestis Antiqua, complete genomealcohol dehydrogenase3e-28125
NC_008149:2773139:2777636277763627787751140Yersinia pestis Nepal516, complete genomealcohol dehydrogenase3e-28125
NC_004088:2937077:2941574294157429427131140Yersinia pestis KIM, complete genomealcohol dehydrogenase class III; formaldehyde dehydrogenase3e-28125
NC_014029:1760948:1779426177942617805651140Yersinia pestis Z176003 chromosome, complete genomealcohol dehydrogenase3e-28125
NC_017154:1707500:1721519172151917226581140Yersinia pestis D106004 chromosome, complete genomealcohol dehydrogenase3e-28125
NC_017160:2054289:2058786205878620599251140Yersinia pestis D182038 chromosome, complete genomealcohol dehydrogenase3e-28125
NC_017168:3948514:3953011395301139541501140Yersinia pestis A1122 chromosome, complete genomealcohol dehydrogenase3e-28125
NC_017265:2557476:2561973256197325631121140Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Alcohol dehydrogenase class III;Glutathione-dependent formaldehyde dehydrogenase3e-28125
NC_007645:1443296:1446857144685714479661110Hahella chejuensis KCTC 2396, complete genomeZn-dependent alcohol dehydrogenase, class III2e-27123
NC_015410:3093465:3142299314229931434111113Pseudomonas mendocina NK-01 chromosome, complete genomeclass III alcohol dehydrogenase2e-27123
NC_008701:195850:2471422471422482301089Pyrobaculum islandicum DSM 4184, complete genomeAlcohol dehydrogenase, zinc-binding domain protein4e-27122
NC_015312:681678:7009607009607020451086Pseudonocardia dioxanivorans CB1190 chromosome, complete genomemycothiol-dependent formaldehyde dehydrogenase4e-27122
NC_004578:1719849:1720850172085017219621113Pseudomonas syringae pv. tomato str. DC3000, complete genomealcohol dehydrogenase, class III1e-26121
NC_015976:2064387:2079631207963120807431113Sphingobium sp. SYK-6, complete genomealcohol dehydrogenase class III2e-26120
NC_009921:3419978:3442412344241234434971086Frankia sp. EAN1pec, complete genomeAlcohol dehydrogenase zinc-binding domain protein5e-26118
NC_016111:986936:1002089100208910031711083Streptomyces cattleya NRRL 8057, complete genomeNAD/mycothiol-dependent formaldehyde dehydrogenase7e-26118
NC_013757:3012130:3013698301369830147891092Geodermatophilus obscurus DSM 43160, complete genomemycothiol-dependent formaldehyde dehydrogenase7e-26118
NC_015563:4773415:4790888479088847919971110Delftia sp. Cs1-4 chromosome, complete genomeS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase9e-26118
NC_012522:3224526:3251682325168232527941113Rhodococcus opacus B4, complete genomeputative zinc-containing alcohol dehydrogenase3e-25116
NC_009997:2967521:2985316298531629864551140Shewanella baltica OS195, complete genomeS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase3e-25116
NC_016901:2916988:2934783293478329359221140Shewanella baltica OS678 chromosome, complete genomeS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase3e-25116
NC_016513:810259:8278628278628289861125Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completealcohol dehydrogenase class III3e-25116
NC_003106:2060628:2065076206507620661611086Sulfolobus tokodaii str. 7, complete genomehypothetical alcohol dehydrogenase6e-25115
NC_013757:3012130:3029429302942930305141086Geodermatophilus obscurus DSM 43160, complete genomemycothiol-dependent formaldehyde dehydrogenase1e-24114
NC_018681:7624000:7639710763971076407951086Nocardia brasiliensis ATCC 700358 chromosome, complete genomemycothiol-dependent formaldehyde dehydrogenase2e-24114
NC_014121:2090630:2094948209494820960661119Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completealcohol dehydrogenase class III2e-24113
NC_014228:1929665:1979637197963719807461110Xenorhabdus nematophila ATCC 19061, complete genomealcohol dehydrogenase class III3e-24112
NC_021184:2975975:2989078298907829901751098Desulfotomaculum gibsoniae DSM 7213, complete genomeZn-dependent alcohol dehydrogenase, class III3e-24112
NC_008319:1306482:1344433134443313456441212Synechococcus sp. CC9311, complete genomeD-isomer specific 2-hydroxyacid dehydrogenase family protein2e-23110
NC_007333:1457000:1474920147492014759991080Thermobifida fusca YX, complete genomealcohol dehydrogenase class III2e-23110
NC_020181:1057476:1071637107163710727551119Enterobacter aerogenes EA1509E, complete genomeS-(hydroxymethyl)glutathione dehydrogenase2e-23110
NC_015663:4347187:4350383435038343515011119Enterobacter aerogenes KCTC 2190 chromosome, complete genomeS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase2e-23110
NC_009338:4869700:4880925488092548820311107Mycobacterium gilvum PYR-GCK chromosome, complete genomealcohol dehydrogenase4e-23109
NC_008278:175500:1957261957261968381113Frankia alni ACN14a, complete genomeAlcohol dehydrogenase4e-23109
NC_015942:722980:7276997276997288081110Acidithiobacillus ferrivorans SS3 chromosome, complete genomeS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase4e-23108
NC_009656:4527457:4546711454671145478231113Pseudomonas aeruginosa PA7 chromosome, complete genomearyl-alcohol dehydrogenase4e-23108
NC_010338:3743000:3794413379441337955221110Caulobacter sp. K31, complete genomeS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase5e-23108
NC_007181:1963887:1974724197472419758151092Sulfolobus acidocaldarius DSM 639, complete genomeconserved alcohol dehydrogenase1e-22107
NC_009481:822975:8379048379048390161113Synechococcus sp. WH 7803 chromosome, complete genomeglutathione-dependent formaldehyde dehydrogenase1e-22107
NC_008699:2260606:2267364226736422684641101Nocardioides sp. JS614, complete genomeAlcohol dehydrogenase, zinc-binding domain protein3e-22106
NC_010067:1300606:1312825131282513139431119Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-22105
NC_011205:1633353:1649815164981516509331119Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase7e-22105
NC_011094:1683979:1688393168839316895111119Salmonella enterica subsp. enterica serovar Schwarzengrund strS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase1e-21104
NC_011274:1544653:1561100156110015622181119Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91alcohol dehydrogenase class III1e-21104
NC_006905:1726416:1730830173083017319481119Salmonella enterica subsp. enterica serovar Choleraesuis stralcohol dehydrogenase class III1e-21104
NC_010397:2063561:2084542208454220856481107Mycobacterium abscessus chromosome Chromosome, complete sequenceProbable zinc-type alcohol dehydrogenase AdhD9e-22104
NC_003197:1713259:1717673171767317187911119Salmonella typhimurium LT2, complete genomealcohol dehydrogenase class III1e-21103
NC_011080:1709612:1714026171402617151441119Salmonella enterica subsp. enterica serovar Newport str. SL254,S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase1e-21103
NC_013521:1713416:1716681171668117177811101Sanguibacter keddieii DSM 10542, complete genomemycothiol-dependent formaldehyde dehydrogenase2e-21103
NC_015761:1599000:1600841160084116019591119Salmonella bongori NCTC 12419, complete genomealcohol dehydrogenase class III2e-21103
NC_011083:1761352:1765775176577517668931119Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase2e-21103
NC_007614:1662874:1681942168194216830481107Nitrosospira multiformis ATCC 25196 chromosome 1, completeZinc-containing alcohol dehydrogenase superfamily2e-21103
NC_016947:2380500:2425961242596124270671107Mycobacterium intracellulare MOTT-02 chromosome, complete genomealcohol dehydrogenase3e-21103
NC_008705:3377697:3401495340149534026011107Mycobacterium sp. KMS, complete genomeAlcohol dehydrogenase GroES domain protein3e-21103
NC_009077:3323291:3347089334708933481951107Mycobacterium sp. JLS, complete genomeAlcohol dehydrogenase GroES domain protein3e-21103
NC_008146:3349415:3373213337321333743191107Mycobacterium sp. MCS, complete genomeAlcohol dehydrogenase GroES-like protein3e-21103
NC_011149:1429523:1488352148835214894701119Salmonella enterica subsp. enterica serovar Agona str. SL483,S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase1e-21103
NC_010102:1388344:1404774140477414058921119Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-21103
NC_016604:5228500:5233739523373952348451107Mycobacterium rhodesiae NBB3 chromosome, complete genomeoxidoreductase, Rxyl_3153 family1e-21103
NC_017046:1669995:1674409167440916755271119Salmonella enterica subsp. enterica serovar Typhimurium str. 798alcohol dehydrogenase class III1e-21103
NC_016863:1671428:1675842167584216769601119Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1alcohol dehydrogenase class III1e-21103
NC_016860:1710950:1715364171536417164821119Salmonella enterica subsp. enterica serovar Typhimurium strS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase1e-21103
NC_016857:1670112:1674526167452616756441119Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74alcohol dehydrogenase class III1e-21103
NC_016856:1723236:1727650172765017287681119Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Salcohol dehydrogenase class III1e-21103
NC_016831:1468691:1473105147310514742231119Salmonella enterica subsp. enterica serovar Gallinarum/pullorumalcohol dehydrogenase class III (glutathione-dependent formaldehyde dehydrogenase) (fdh) (faldh)1e-21103
NC_016810:1670112:1674526167452616756441119Salmonella enterica subsp. enterica serovar Typhimurium stralcohol dehydrogenase class III1e-21103
NC_012125:2143246:2159689215968921608071119Salmonella enterica subsp. enterica serovar Paratyphi C strainalcohol dehydrogenase1e-21103
NC_011294:1493849:1510294151029415114121119Salmonella enterica subsp. enterica serovar Enteritidis stralcohol dehydrogenase class III1e-21103
NC_009952:442029:4583654583654594771113Dinoroseobacter shibae DFL 12, complete genomealcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase3e-21102
NC_012522:7763426:7769641776964177707651125Rhodococcus opacus B4, complete genomeputative alcohol dehydrogenase3e-21102
NC_010612:3813481:3835065383506538361711107Mycobacterium marinum M, complete genomezinc-containing alcohol dehydrogenase NAD- dependent2e-20100
NC_016147:3023180:3035461303546130365851125Pseudoxanthomonas spadix BD-a59 chromosome, complete genomealcohol dehydrogenase2e-20100
NC_008595:661507:6798946798946810211128Mycobacterium avium 104, complete genomealcohol dehydrogenase B2e-1997.1
NC_015656:132633:1640571640571651631107Frankia symbiont of Datisca glomerata chromosome, complete genomealcohol dehydrogenase GroES domain-containing protein2e-1996.7
NC_014328:1739578:1755480175548017565741095Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative Zn-dependent alcohol dehydrogenase4e-1995.9
NC_017030:8766757:8775379877537987764971119Corallococcus coralloides DSM 2259 chromosome, complete genomealcohol dehydrogenase4e-1995.9
NC_013131:7437831:7454719745471974558641146Catenulispora acidiphila DSM 44928, complete genomeAlcohol dehydrogenase GroES domain protein4e-1995.9
NC_008595:1911491:1932859193285919339921134Mycobacterium avium 104, complete genomealcohol dehydrogenase B4e-1995.9
NC_010512:110932:1122671122671133941128Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceAlcohol dehydrogenase zinc-binding domain protein5e-1892.4
NC_008699:1247423:1249339124933912504601122Nocardioides sp. JS614, complete genomeAlcohol dehydrogenase, zinc-binding domain protein1e-1791.3
NC_009832:1280938:1287524128752412886181095Serratia proteamaculans 568, complete genomeAlcohol dehydrogenase zinc-binding domain protein1e-1790.9
NC_008596:4104476:4110996411099641121351140Mycobacterium smegmatis str. MC2 155, complete genomearyl-alcohol dehydrogenase6e-1788.6
NC_017955:2327500:2340738234073823418501113Modestobacter marinus, complete genomearyl-alcohol dehydrogenase2e-1687
NC_008228:4696338:4698619469861946997371119Pseudoalteromonas atlantica T6c, complete genomeAlcohol dehydrogenase, zinc-binding3e-1686.3
NC_016948:1796989:1815989181598918171521164Mycobacterium intracellulare MOTT-64 chromosome, complete genomeadhD1e-1584.7
NC_018581:4992952:4997023499702349981501128Gordonia sp. KTR9 chromosome, complete genomeputative 6-hydroxyhexanoate dehydrogenase2e-1584
NC_015580:3252534:3268055326805532691521098Novosphingobium sp. PP1Y, complete genomearyl-alcohol dehydrogenase3e-1583.2
NC_009921:5371483:5385319538531953864071089Frankia sp. EAN1pec, complete genomeAlcohol dehydrogenase zinc-binding domain protein3e-1376.3
NC_014006:1365207:1385006138500613860971092Sphingobium japonicum UT26S chromosome 1, complete genomeZn-dependent alcohol dehydrogenase6e-1272
NC_016885:1732257:1742632174263217436901059Pyrobaculum oguniense TE7 chromosome, complete genomeZn-dependent alcohol dehydrogenase3e-1169.7
NC_015844:5375784:5392755539275553938731119Zobellia galactanivorans, complete genomealcohol dehydrogenase class 3 / S-(hydroxymethyl)glutathione dehydrogenase1e-1067.8
NC_016582:11878078:118888931188889311889768876Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative oxidoreductase9e-1064.7
NC_009142:2565561:2574996257499625760091014Saccharopolyspora erythraea NRRL 2338, complete genomealcohol dehydrogenase, zinc-binding2e-0860.1
NC_004369:1051013:105177610517761052435660Corynebacterium efficiens YS-314, complete genomeputative benzyl alcohol dehydrogenase1e-0757.8
NC_016024:1974715:1979566197956619806121047Candidatus Chloracidobacterium thermophilum B chromosome chromosomeZn-dependent alcohol dehydrogenase2e-0757
NC_004369:1051013:105241910524191052901483Corynebacterium efficiens YS-314, complete genomeputative benzyl alcohol dehydrogenase4e-0756.2
NC_009454:2502724:2513393251339325145021110Pelotomaculum thermopropionicum SI, complete genomethreonine dehydrogenase and related Zn-dependent dehydrogenases9e-0755.1
NC_009439:101174:1195561195561205781023Pseudomonas mendocina ymp, complete genomealcohol dehydrogenase2e-0653.9
NC_006087:2326143:2330595233059523316471053Leifsonia xyli subsp. xyli str. CTCB07, complete genomealcohol dehydrogenase3e-0653.5
NC_017272:921193:944363944363945346984Thermus thermophilus SG0.5JP17-16 chromosome, complete genomezinc-binding alcohol dehydrogenase family protein5e-0652.4