Pre_GI Gene

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Host: NC_011205 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011205:1633353 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
163335316372733921ATP-dependent RNA helicase HrpAQuickGO ontologyBLASTP
16373371638137801hypothetical proteinBLASTP
16382541638784531cytochrome b561QuickGO ontologyBLASTP
16390551639717663methyltransferase type 12QuickGO ontologyBLASTP
164018116417311551inner membrane proteinQuickGO ontologyBLASTP
16418681642548681ABC transporter membrane componentQuickGO ontologyBLASTP
16425451643276732ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
16433011643948648ABC transporter permeaseQuickGO ontologyBLASTP
16456231645967345cyanate transportQuickGO ontologyBLASTP
164608816473141227secreted effector proteinQuickGO ontologyBLASTP
16484451648600156hypothetical proteinBLASTP
16486201648745126hypothetical proteinBLASTP
16495081649783276hypothetical proteinBLASTP
164981516509331119S-hydroxymethylglutathione dehydrogenaseclass III alcohol dehydrogenaseQuickGO ontologyBLASTP
165110216527271626methyl-accepting chemotaxis protein IIIQuickGO ontologyBLASTP
16527881653711924LysR substrate binding domain-containing proteinQuickGO ontologyBLASTP
165400416553471344hypothetical proteinBLASTP
165539616569041509carboxylesterase type BQuickGO ontologyBLASTP
165716016587791620glucan biosynthesis protein DQuickGO ontologyBLASTP
16589841659550567hypothetical proteinBLASTP
165956216606981137L-lactate oxidaseQuickGO ontologyBLASTP