Pre_GI Gene

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Host: NC_015564 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015564:4727630 Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genome

Host Lineage: Amycolicicoccus subflavus; Amycolicicoccus; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Oil pollution has become a global issue because of its severe ecological impact and destruction. Bioremediation is proved to be an effective process to restore the oil polluted environments. Bacteria from oil contaminated environment always have the abilities for degradation of hydrocarbons and are thought to be useful in bioremediation of oil pollution. Amycolicicoccus subflavus DQS-9A1T, an actinomycete, is a type strain of newly published novel species in the novel genus Amycolicicoccus, isolated from the crude oil-polluted saline soil in China. The complete genome sequence of Amycolicicoccus subflavus DQS-9A1 will provide new strategies for bioremediation of oil contaminated environment.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1317191707chromosomal replication initiator protein dnaAQuickGO ontologyBLASTP
197235641593DNA polymerase III subunit betaQuickGO ontologyBLASTP
357247651194DNA replication and repair protein recFQuickGO ontologyBLASTP
48155312498hypothetical proteinBLASTP
547875172040DNA gyrase subunit BQuickGO ontologyBLASTP
7616101622547DNA topoisomerase subunit AQuickGO ontologyBLASTP
1015910302144hypothetical protein
1029210675384hypothetical proteinBLASTP
1085711000144hypothetical protein
110061107873tRNA-AlaQuickGO ontology
11094124101317major facilitator superfamily transporterQuickGO ontologyBLASTP
13219143611143putative alcohol dehydrogenase zinc-containingQuickGO ontologyBLASTP
1435814789432hypothetical proteinBLASTP
14786161201335ATP-dependent RNA helicaseQuickGO ontologyBLASTP
47276304728367738hypothetical protein
47284504729175726TetR family transcriptional regulatorQuickGO ontologyBLASTP
47293194730317999thioredoxin reductaseQuickGO ontologyBLASTP
47303704730690321thioredoxinQuickGO ontologyBLASTP
473083247320011170N-acetylmuramoyl-L-alanine amidaseQuickGO ontologyBLASTP
47320184732641624hypothetical proteinBLASTP
473281947338591041putative chromosome partitioning protein ParBQuickGO ontologyBLASTP
473385647348601005chromosome partitioning protein ParAQuickGO ontologyBLASTP
47348644735538675ribosomal RNA small subunit methyltransferase GQuickGO ontologyBLASTP
47358274736336510hypothetical proteinBLASTP
473645247375521101putative OxaA family proteinQuickGO ontologyBLASTP
47375574737688132hypothetical protein
4738282473842514450S ribosomal protein L34QuickGO ontologyBLASTP