Pre_GI Gene

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Host: NC_003197 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003197:1713259 Salmonella typhimurium LT2, complete genome

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
171325917146021344putative cytoplasmic proteinQuickGO ontologyBLASTP
17148951715818924putative transcriptional regulatorQuickGO ontologyBLASTP
171587917175041626methyl-accepting chemotaxis protein IIIQuickGO ontologyBLASTP
171767317187911119alcohol dehydrogenase class IIIQuickGO ontologyBLASTP
17188231719098276putative cytoplasmic proteinQuickGO ontologyBLASTP
17201511720867717putative inner membrane proteinQuickGO ontologyBLASTP
172129317225191227secreted effector proteinQuickGO ontologyBLASTP
17226401722984345putative inner membrane proteinQuickGO ontologyBLASTP
17238911724652762putative periplasmic binding proteinQuickGO ontologyBLASTP
17246591725306648putative ABC transporter permease componentQuickGO ontologyBLASTP
17253311726062732putative ABC-type polar amino acid transport system ATPase componentQuickGO ontologyBLASTP
17260591726739681putative ABC-type transport system membrane componentQuickGO ontologyBLASTP
172687617284261551putative inner membrane proteinQuickGO ontologyBLASTP
17291151729552438putative SAM-dependent methyltransferaseQuickGO ontologyBLASTP
17298231730353531cytochrome b561QuickGO ontologyBLASTP
17304701731270801putative inner membrane proteinQuickGO ontologyBLASTP
173133417352363903ATP-dependent helicaseQuickGO ontologyBLASTP
17354371736042606acyl carrier protein phosphodiesteraseQuickGO ontologyBLASTP
17360391736488450putative inner membrane proteinQuickGO ontologyBLASTP