Pre_GI: BLASTP Hits

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Query: NC_008781:2611702:2636646 Polaromonas naphthalenivorans CJ2, complete genome

Start: 2636646, End: 2639090, Length: 2445

Host Lineage: Polaromonas naphthalenivorans; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Naphthalene-degrading bacterium. Polaromonas naphthalenivorans was isolated from naphthalene-contaminated, freshwater sediment. This organism is capable of aerobic degradation of naphthalene at temperatures of less than 20 degrees C. Naphthalene is a polycyclic aromatic hydrocarbon (PAH). PAHs can be toxic and/or carcinogenic, therefore PAH contamination is of considerable concern.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013422:1755875:1755875175587517583342460Halothiobacillus neapolitanus c2, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region0691
NC_015221:12389:1238912389149232535Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family3e-175616
NC_006371:1743982:1748726174872617511222397Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical TrbE protein2e-172607
NC_015410:3209954:3207528320752832099572430Pseudomonas mendocina NK-01 chromosome, complete genomeconjugal transfer ATPase TrbE3e-166586
NC_015942:1889421:1889881188988118924332553Acidithiobacillus ferrivorans SS3 chromosome, complete genomeCagE, TrbE, VirB component of type IV transporter system7e-165581
NC_015556:2265940:2265940226594022683692430Pseudomonas fulva 12-X chromosome, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region2e-163576
NC_015381:2859000:2877033287703328794832451Burkholderia gladioli BSR3 chromosome 1, complete sequenceATPase1e-162573
NC_013861:3341955:3359877335987733624142538Legionella longbeachae NSW150, complete genomeConjugal transfer protein trbE precursor2e-162573
NC_014910:2930860:2930860293086029333192460Alicycliphilus denitrificans BC chromosome, complete genomecage, trbe, virb component of type iv transporter system, conserved region protein9e-161568
NC_011992:3752867:3752867375286737553382472Acidovorax ebreus TPSY, complete genomeCagE TrbE VirB component of type IV transporter system1e-159564
NC_010002:2933909:2964490296449029669612472Delftia acidovorans SPH-1, complete genomeAAA ATPase6e-159561
NC_018691:3082000:3099974309997431024242451Alcanivorax dieselolei B5 chromosome, complete genomeATPase2e-158560
NC_008577:1489643:1495263149526314977132451Shewanella sp. ANA-3 chromosome 1, complete sequenceAAA ATPase3e-158559
NC_015422:1643000:1663023166302316654762454Alicycliphilus denitrificans K601 chromosome, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region5e-158558
NC_009656:3817261:3838044383804438404972454Pseudomonas aeruginosa PA7 chromosome, complete genomeconjugal transfer ATPase TrbE2e-157556
NC_003295:2787371:2787371278737127898212451Ralstonia solanacearum GMI1000, complete genomePROBABLE CONJUGAL TRANSFER PROTEIN TRBE9e-157554
NC_010170:4800000:4880844488084448833062463Bordetella petrii, complete genomeconjugal transfer protein TrbE5e-156552
NC_014834:959986:9776529776529801172466Rhodopseudomonas palustris DX-1 chromosome, complete genomeAAA ATPase1e-154547
NC_011206:1293880:1291361129136112938832523Acidithiobacillus ferrooxidans ATCC 53993, complete genomeCagE TrbE VirB component of type IV transporter system3e-153542
NC_009937:4392108:4411982441198244144202439Azorhizobium caulinodans ORS 571, complete genomeATPase precursor3e-151536
NC_009720:3317642:3338681333868133411192439Xanthobacter autotrophicus Py2, complete genomeconjugal transfer ATPase TrbE3e-150533
NC_014834:3472000:3503841350384135062822442Rhodopseudomonas palustris DX-1 chromosome, complete genometype IV transporter subunit CagE/TrbE/VirB2e-149530
NC_009720:4406991:4425146442514644275842439Xanthobacter autotrophicus Py2, complete genomeconjugal transfer ATPase TrbE2e-149530
NC_009720:670853:6708536708536732822430Xanthobacter autotrophicus Py2, complete genomeconjugal transfer ATPase TrbE4e-149529
NC_010125:1011430:1030697103069710331232427Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein trbE6e-149528
NC_014834:614890:6148906148906173312442Rhodopseudomonas palustris DX-1 chromosome, complete genometype IV transporter subunit CagE/TrbE/VirB2e-148526
NC_009720:813157:8327138327138351512439Xanthobacter autotrophicus Py2, complete genomeconjugal transfer ATPase TrbE7e-148525
NC_009719:1972545:1988312198831219907382427Parvibaculum lavamentivorans DS-1 chromosome, complete genomeconjugal transfer ATPase TrbE2e-147523
NC_011365:1135750:1136493113649311389192427Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeconjugal transfer ATPase TrbE3e-146519
NC_010125:2813653:2834802283480228372342433Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein; TrbE6e-146518
NC_010725:3315007:3312572331257233150102439Methylobacterium populi BJ001, complete genomeAAA ATPase6e-146518
NC_015186:2839668:2860699286069928634192721Acidiphilium multivorum AIU301, complete genomeconjugal transfer protein TrbE8e-146518
NC_014500:894136:8941368941368966042469Dickeya dadantii 3937 chromosome, complete genomeConjugative transfer protein TrbE1e-145517
NC_008686:1439328:1441768144176814442782511Paracoccus denitrificans PD1222 chromosome 1, complete sequenceAAA ATPase3e-144513
NC_007925:3911323:3930710393071039331512442Rhodopseudomonas palustris BisB18, complete genomeATPase9e-143508
NC_010338:4148667:4148667414866741511232457Caulobacter sp. K31, complete genomeAAA ATPase4e-142506
NC_009668:529175:5351505351505376602511Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceconjugal transfer ATPase TrbE1e-140501
NC_015437:697051:7258257258257282902466Selenomonas sputigena ATCC 35185 chromosome, complete genomeAAA ATPase4e-117422
NC_013192:1033177:1054164105416410566472484Leptotrichia buccalis DSM 1135, complete genomeCagE TrbE VirB component of type IV transporter system4e-96353
NC_015385:1875671:1875671187567118782442574Treponema succinifaciens DSM 2489 chromosome, complete genomeAAA ATPase8e-96352
NC_015386:125499:1367791367791393552577Treponema succinifaciens DSM 2489 plasmid pTRESU01, completeCagE, TrbE, VirB component of type IV transporter system, conserved region1e-95351
NC_000963:110500:1140231140231164402418Rickettsia prowazekii str. Madrid E, complete genomeVIRB4 PROTEIN PRECURSOR (virB4)6e-60233
NC_017050:110500:1140211140211164382418Rickettsia prowazekii str. Katsinyian chromosome, complete genometype IV secretion system ATPase VirB46e-60233
NC_017057:110000:1141481141481165652418Rickettsia prowazekii str. RpGvF24 chromosome, complete genometype IV secretion system ATPase VirB48e-60232
NC_017056:110500:1140311140311164482418Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genometype IV secretion system ATPase VirB48e-60232
NC_017051:109000:1122251122251146422418Rickettsia prowazekii str. Dachau chromosome, complete genometype IV secretion system ATPase VirB48e-60232
NC_017049:109000:1122221122221146392418Rickettsia prowazekii str. Chernikova chromosome, complete genometype IV secretion system ATPase VirB48e-60232
NC_017048:452000:4560924560924585092418Rickettsia prowazekii str. GvV257 chromosome, complete genometype IV secretion system ATPase VirB48e-60232
NC_017028:180219:1951301951301975472418Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completetype IV secretion system ATPase VirB44e-59230
NC_017044:130000:1353941353941378112418Rickettsia parkeri str. Portsmouth chromosome, complete genometype IV secretion system ATPase VirB46e-59229
NC_009879:107890:1122791122791146962418Rickettsia canadensis str. McKiel, complete genomeType IV secretion/conjugal transfer ATPase, VirB4 family protein5e-59229
NC_016929:109500:1131401131401155572418Rickettsia canadensis str. CA410 chromosome, complete genometype IV secretion system ATPase VirB45e-59229
NC_017066:33268:4454644546469632418Rickettsia typhi str. TH1527 chromosome, complete genometype IV secretion system ATPase VirB41e-58228
NC_017062:33268:4451344513469302418Rickettsia typhi str. B9991CWPP chromosome, complete genometype IV secretion system ATPase VirB41e-58228
NC_006142:33268:4454644546469632418Rickettsia typhi str. Wilmington, complete genomeVirB4 protein precursor1e-58228
NC_005295:873500:8983268983269007282403Ehrlichia ruminantium str. Welgevonden, complete genometype IV secretion system protein VirB42e-52207
NC_006832:853500:8778888778888802932406Ehrlichia ruminantium str. Welgevonden, complete genomeVIRB4 protein precursor2e-52207
NC_006831:849500:8734978734978759022406Ehrlichia ruminantium str. Gardel, complete genomeVIRB4 protein precursor6e-52206
NC_007354:756500:7787647787647811662403Ehrlichia canis str. Jake, complete genomeCagE, TrbE, VirB family component of typeIV transporter system3e-51204
NC_007798:758873:7709267709267733372412Neorickettsia sennetsu str. Miyayama, complete genometype IV secretion system protein VirB43e-51204
NC_007799:474931:4813444813444837462403Ehrlichia chaffeensis str. Arkansas, complete genometype IV secretion system protein VirB41e-50202
NC_009488:1871912:1877046187704618794632418Orientia tsutsugamushi str. Boryong, complete genometype IV secretion system ATPase VirB42e-50201
NC_010793:794494:7995707995708019872418Orientia tsutsugamushi str. Ikeda, complete genometype IV secretion system protein VirB42e-50201
NC_007950:206474:2165752165752191272553Polaromonas sp. JS666 plasmid 2, complete sequenceType IV secretory pathway VirB4 components-like2e-47191
NC_015850:2048251:2076658207665820790212364Acidithiobacillus caldus SM-1 chromosome, complete genometype IV secretory pathway VirB4 components-like protein3e-46187
NC_010682:1593108:1614519161451916169662448Ralstonia pickettii 12J chromosome 1, complete sequencetype IV secretory pathway VirB4 components-like protein4e-44180
NC_016616:2699350:2726787272678727293782592Dechlorosoma suillum PS chromosome, complete genometype IV secretory pathway, VirB4 component1e-41172
NC_015593:1587684:1602558160255816049302373Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completetype IV secretion/conjugal transfer ATPase VirB4 family2e-41171
NC_008757:77023:97607976071000722466Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeType IV secretory pathway VirB4 components-like protein3e-32140
NC_011985:3869998:3871859387185938742462388Agrobacterium radiobacter K84 chromosome 1, complete genometype IV secretion protein AvhB46e-32140
NC_017271:2935643:2964110296411029665512442Xanthomonas campestris pv. raphani 756C chromosome, completeVirB4 protein1e-29132
NC_007643:955362:960586960586961362777Rhodospirillum rubrum ATCC 11170, complete genomeconjugal transfer protein2e-29131
NC_013722:2150882:2156995215699521594662472Xanthomonas albilineans, complete genomeprobable type iv secretion system protein virb44e-29130
NC_010943:3034366:3043399304339930458462448Stenotrophomonas maltophilia K279a, complete genomeputative type IV secretion conjugal transfer protein6e-29129
NC_015947:2752450:2763456276345627659032448Burkholderia sp. JV3 chromosome, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family7e-29129
NC_011071:2733438:2745103274510327475502448Stenotrophomonas maltophilia R551-3, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family9e-29129
NC_008786:4102606:4103355410335541058262472Verminephrobacter eiseniae EF01-2, complete genomeType IV secretory pathway VirB4 components-like protein3e-28127
NC_007086:1936505:1964408196440819668612454Xanthomonas campestris pv. campestris str. 8004, complete genomeVirB4 protein1e-27125
NC_003902:2933121:2943358294335829458112454Xanthomonas campestris pv. campestris str. ATCC 33913, completeVirB4 protein1e-27125
NC_003919:3060484:3079127307912730815802454Xanthomonas axonopodis pv. citri str. 306, complete genomeVirB4 protein7e-27123
NC_010688:1908012:1937139193713919395922454Xanthomonas campestris pv. campestris, complete genometype IV secretion system energizing component VirB44e-26120
NC_014801:1:2335823358261262769Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet,type IV secretion system protein VirB43e-25117
NC_016513:2103958:2125571212557121283422772Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeATPase2e-24115
NC_010688:1908012:1944292194429219458151524Xanthomonas campestris pv. campestris, complete genomeVirB4 protein3e-24114
NC_019973:5694620:5708002570800257103712370Mesorhizobium australicum WSM2073, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family7e-24113
NC_014923:5765660:5779042577904257814112370Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completetype IV secretion/conjugal transfer ATPase, VirB4 family7e-24113
NC_015675:6276357:6333713633371363360822370Mesorhizobium opportunistum WSM2075 chromosome, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family7e-24113
NC_013416:939668:9496729496729512131542Aggregatibacter actinomycetemcomitans D11S-1, complete genomeATPase2e-22108
NC_020181:473170:4949524949524976902739Enterobacter aerogenes EA1509E, complete genomeATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4)2e-21105
NC_009792:859228:8810098810098837472739Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-21105
NC_012731:3411161:3450241345024134529792739Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometype IV secretory pathway VirB3-4 component4e-21103
NC_013592:2968500:2998530299853030012742745Dickeya dadantii Ech586, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region9e-21102
NC_016845:3448881:3469356346935634720942739Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative type IV secretory pathway VirB4 component1e-20102
NC_011092:76993:8981789817925672751Salmonella enterica subsp. enterica serovar Schwarzengrund strTriC protein2e-1998.6
NC_010515:1124298:1135251113525111377312481Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family3e-1997.8
NC_009254:365812:3658123658123682802469Burkholderia vietnamiensis G4 chromosome 3, complete sequencetype IV secretion/conjugal transfer ATPase3e-1997.4
NC_011001:372185:3810183810183834982481Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative type IV secretion system protein VirB44e-1997.4
NC_008543:127675:1494901494901519702481Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family2e-1895.1
NC_008061:2106848:2117799211779921202792481Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family2e-1895.1
NC_014555:1526775:1540379154037915427482370Helicobacter pylori PeCan4 chromosome, complete genomeVirB4-like protein1e-1792.4
NC_014256:448710:4557574557574579102154Helicobacter pylori B8 chromosome, complete genomeprotein virB42e-1791.7
NC_010676:2793237:2793237279323727957022466Burkholderia phytofirmans PsJN chromosome 2, complete sequencetype IV secretion/conjugal transfer ATPase, VirB4 family2e-1791.7
NC_016818:1795576:1829965182996518327122748Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetype IV secretory pathway, VirB4 component4e-1790.9
NC_018939:454000:4593394593394617622424Helicobacter pylori 26695 chromosome, complete genomeVirB4-like protein4e-1790.5
NC_000915:453958:4593334593334617562424Helicobacter pylori 26695, complete genomeVirB4 homolog4e-1790.5
NC_011283:1811000:1847938184793818506852748Klebsiella pneumoniae 342 chromosome, complete genometype IV secretion/conjugal transfer ATPase2e-1688.6
NC_014500:3097362:3147941314794131507212781Dickeya dadantii 3937 chromosome, complete genomeATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4)2e-1688.6
NC_010170:3908500:3916385391638539188292445Bordetella petrii, complete genometype IV secretion system protein VirB42e-1688.2
NC_004547:1873390:1874142187414218768892748Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative conjugal transfer protein3e-1687.8
NC_012912:1701231:1705041170504117077882748Dickeya zeae Ech1591, complete genomeCagE TrbE VirB component of type IV transporter system5e-1687
NC_012026:960000:9603409603409627692430Anaplasma marginale str. Florida, complete genomeVirB4 protein7e-1686.7
NC_004842:950058:9562099562099586382430Anaplasma marginale str. St. Maries, complete genomeVirB4 protein7e-1686.7
NC_016626:1699500:1740570174057017432332664Burkholderia sp. YI23 plasmid byi_1p, complete sequenceType IV secretion system protein VirB48e-1686.3
NC_017047:2079368:2079368207936820821152748Rahnella aquatilis HX2 chromosome, complete genomeputative conjugal transfer protein2e-1585.1
NC_017361:1528239:1530624153062415330472424Helicobacter pylori SouthAfrica7 chromosome, complete genomeVirB4-like protein3e-1584.3
NC_014914:127873:1317401317401341452406Taylorella equigenitalis MCE9 chromosome, complete genomeVirB4 ATPase like protein1e-1482.4
NC_012483:3731542:3781113378111337834792367Acidobacterium capsulatum ATCC 51196, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family2e-1481.6
NC_017367:278916:2876102876102901082499Helicobacter pylori F57, complete genomeDNA transfer protein2e-1378.2
NC_017376:57500:9483294832973302499Helicobacter pylori SNT49 chromosome, complete genomeDNA transfer protein3e-1377.8
NC_017358:220900:2311372311372336352499Helicobacter pylori Cuz20 chromosome, complete genomeDNA transfer protein5e-1377
NC_010698:870312:9080599080599105572499Helicobacter pylori Shi470, complete genomeDNA transfer protein6e-1377
NC_017361:930280:9679779679779704752499Helicobacter pylori SouthAfrica7 chromosome, complete genomeDNA transfer protein6e-1376.6
NC_017371:1030148:1034552103455210364771926Helicobacter pylori Gambia94/24 chromosome, complete genomeDNA transfer protein6e-1376.6
NC_017379:1035464:1054184105418410566822499Helicobacter pylori Puno135 chromosome, complete genomeDNA transfer protein1e-1275.9
NC_010524:933191:9346559346559371472493Leptothrix cholodnii SP-6, complete genometype IV secretion/conjugal transfer ATPase, VirB4 family7e-1273.2
NC_012912:1295653:131348813134881313904417Dickeya zeae Ech1591, complete genome7e-1170.1
NC_006833:976010:9866539866539890072355Wolbachia endosymbiont strain TRS of Brugia malayi, completeType IV secretory pathway, VirB4 components4e-1067.4
NC_010554:2646806:2689243268924326916422400Proteus mirabilis HI4320, complete genomeplasmid pilus assembly protein5e-1067
NC_009140:60806:8152081520839672448Salmonella enterica enterica sv Newport str. SL254, completetype IV conjugative transfer system protein TraC2e-0965.1
NC_010814:243384:2914532914532939002448Geobacter lovleyi SZ, complete genomesex pilus assembly protein1e-0862.8
NC_011498:448000:4871074871074895292423Helicobacter pylori P12, complete genome1e-0862.8
NC_017372:748097:7931967931967957782583Helicobacter pylori India7 chromosome, complete genomeVirB4 type IV secretion ATPase5e-0860.5
NC_014256:485969:5220375220375246132577Helicobacter pylori B8 chromosome, complete genometype IV secretion system protein VirB43e-0654.7
NC_018012:1628364:1647227164722716488881662Thiocystis violascens DSM 198 chromosome, complete genomehypothetical protein4e-0654.3