Pre_GI Gene

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Host: NC_009140 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009140:60806 Salmonella enterica enterica sv Newport str. SL254, complete

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Newport is common worldwide. Outbreak investigations and targeted studies have identified dairy cattle as the main reservoir this serotype. The SL254 strain is an MDR strain from one of two distinct lineages of the Newport serovar. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6080661513708hypothetical proteinBLASTP
61662671485487hypothetical proteinBLASTP
6775368193441quaternary ammonium compound-resistance protein SugE1QuickGO ontologyBLASTP
6819068723534outer membrane lipoprotein BlcQuickGO ontologyBLASTP
68817700461230beta-lactamaseQuickGO ontologyBLASTP
70781720431263transposase InsC3 for insertion sequence ISEc9QuickGO ontologyBLASTP
72283735121230beta-lactamaseQuickGO ontologyBLASTP
7360674139534outer membrane lipoprotein BlcQuickGO ontologyBLASTP
7413674576441quaternary ammonium compound-resistance protein SugE2QuickGO ontologyBLASTP
75181806675487hypothetical proteinBLASTP
8081681523708hypothetical proteinBLASTP
81520839672448type IV conjugative transfer system protein TraCQuickGO ontologyBLASTP
8398284299318hypothetical proteinBLASTP
8429684826531type IV conjugative transfer system signal peptidaseQuickGO ontologyBLASTP
84789860541266type IV conjugative transfer system protein TraWQuickGO ontologyBLASTP
8605186722672cyclic diguanylate phosphodiesterase domain-containing proteinQuickGO ontologyBLASTP
86719877261008type IV conjugative transfer system protein TraUQuickGO ontologyBLASTP