Pre_GI Gene

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Host: NC_017044 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017044:130000 Rickettsia parkeri str. Portsmouth chromosome, complete genome

Host Lineage: Rickettsia parkeri; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: Animal pathogen in Mammalia (intracellular obligate). Rickettsiae are obligate intracellular Gram-negative bacteria mostly found in arthropods, some of which cause mild to severe diseases in humans. Rickettsia parkeri, a member of the spotted fever group Rickettsia (SFGR), was first isolated from the Gulf Coast tick, Amblyomma maculatum, in 1937. In 2004, the first confirmed human infection with R. parkeri was reported in a 40-year-old man from the Tidewater area of coastal Virginia. The agent was isolated in cell culture from an eschar biopsy specimen and designated the Portsmouth strain; recently, the first recognized case of tick bite-associated human infection was described.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
130484130906423hypothetical proteinBLASTP
131870132040171hypothetical protein
13236113265429450S ribosomal protein L28QuickGO ontologyBLASTP
13265113288723750S ribosomal protein L31QuickGO ontologyBLASTP
133495134133639GTP-binding protein YsxCQuickGO ontologyBLASTP
134081135004924acetylglutamate kinaseQuickGO ontologyBLASTP
135017135304288type IV secretion system protein VirB3QuickGO ontologyBLASTP
1353941378112418type IV secretion system ATPase VirB4QuickGO ontologyBLASTP
1379291409102982hypothetical proteinBLASTP
1408971428821986VirB6QuickGO ontologyBLASTP
1428891457892901VirB6QuickGO ontologyBLASTP
1459631486382676hypothetical proteinBLASTP
1487911522523462VirB6QuickGO ontologyBLASTP