Pre_GI Gene

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Host: NC_009879 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009879:107890 Rickettsia canadensis str. McKiel, complete genome

Host Lineage: Rickettsia canadensis; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This organism was originally isolated from ticks in a field study on tick-transmitted diseases of small mammals in Canada. Member of the typhus group of Rickettsiales. Members of this genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, are obligate intracellular pathogens. In both groups, the bacteria are transmitted via an insect, usually a tick, to a host organism where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Rickettsia canadensis was originally thought to be a member of the typhus group of Rickettsiales, however, it is now thought to represent a distict group with the rickettsia.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
107890108651762Ribonucleotide ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
108694108942249alanine racemaseQuickGO ontologyBLASTP
10901510930829450S ribosomal protein L28QuickGO ontologyBLASTP
10930510954123750S ribosomal protein L31QuickGO ontologyBLASTP
10983210990877tRNA-MetQuickGO ontologyBLASTP
110321110980660GTP-binding proteinQuickGO ontologyBLASTP
111131111256126Acetylglutamate kinaseQuickGO ontologyBLASTP
111737112024288Type IV secretory pathway VirB3-like proteinQuickGO ontologyBLASTP
1122791146962418Type IV secretionconjugal transfer ATPase VirB4 family proteinQuickGO ontologyBLASTP
1148381181523315TrbLVirB6 plasmid Conjugative transfer proteinQuickGO ontologyBLASTP
1181391201572019TrbLVirB6 plasmid Conjugative transfer proteinQuickGO ontologyBLASTP
1201641230702907VirB6-like protein of the type IV secretion systemQuickGO ontologyBLASTP
1230771257432667hypothetical proteinBLASTP