Pre_GI: BLASTP Hits

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Query: NC_008146:5106775:5124292 Mycobacterium sp. MCS, complete genome

Start: 5124292, End: 5127360, Length: 3069

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:5144433:5163375516337551664433069Mycobacterium sp. KMS, complete genomeMMPL domain protein01790
NC_009077:4810379:4818713481871348218353123Mycobacterium sp. JLS, complete genomeMMPL domain protein01600
NC_014814:1397429:1417525141752514206473123Mycobacterium sp. Spyr1 chromosome, complete genomeRND superfamily drug exporter01600
NC_016947:666627:6801266801266831222997Mycobacterium intracellulare MOTT-02 chromosome, complete genomeMmpL family transport protein01397
NC_017904:666285:6780176780176809622946Mycobacterium sp. MOTT36Y chromosome, complete genomeMmpL family transport protein01342
NC_013441:2788806:2817878281787828209193042Gordonia bronchialis DSM 43247, complete genomeMMPL domain protein01031
NC_018583:95388:1124971124971155473051Gordonia sp. KTR9 plasmid pGKT3, complete sequenceputative drug exporters, RND superfamily01028
NC_018583:95388:1015351015351045673033Gordonia sp. KTR9 plasmid pGKT3, complete sequenceputative drug exporters, RND superfamily0963
NC_009338:4913510:4930736493073649327812046Mycobacterium gilvum PYR-GCK chromosome, complete genomeMMPL domain-containing protein0872
NC_009338:4913510:4933711493371149351231413Mycobacterium gilvum PYR-GCK chromosome, complete genomeMMPL domain-containing protein0733
NC_016804:1679357:1696909169690917002323324Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative transmembrane transport protein2e-161570
NC_012207:1681971:1699523169952317028463324Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative transmembrane transport protein2e-161570
NC_008769:1709078:1726630172663017299533324Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative transmembrane transport protein mmpL122e-161570
NC_002945:1680751:1698302169830217016253324Mycobacterium bovis AF2122/97, complete genometransmembrane transport protein MmpL121e-160567
NC_002677:1462233:1462233146223314651842952Mycobacterium leprae TN, complete genomeconserved large membrane protein9e-158558
NC_011896:1462258:1462258146225814652092952Mycobacterium leprae Br4923, complete genomehypothetical protein9e-158558
NC_008699:2294361:2313454231345423164953042Nocardioides sp. JS614, complete genomeMMPL domain protein4e-106386
NC_017904:3415700:3430505343050534334202916Mycobacterium sp. MOTT36Y chromosome, complete genomemmpL4_21e-105384
NC_016948:3381848:3396653339665333995682916Mycobacterium intracellulare MOTT-64 chromosome, complete genomemmpL4_22e-104380
NC_010397:4150596:4178667417866741815462880Mycobacterium abscessus chromosome Chromosome, complete sequencePutative membrane protein, MmpL1e-100369
NC_008596:421882:4257604257604286422883Mycobacterium smegmatis str. MC2 155, complete genomeMmp14a protein9e-100365
NC_002944:1285436:1301816130181613047342919Mycobacterium avium subsp. paratuberculosis K-10, complete genomeMmpL4_21e-98361
NC_008596:421882:4286524286524316362985Mycobacterium smegmatis str. MC2 155, complete genomeputative transport protein3e-98360
NC_014168:1294000:1310581131058113134392859Segniliparus rotundus DSM 44985 chromosome, complete genometransport protein9e-98358
NC_010612:90890:9532995329981932865Mycobacterium marinum M, complete genomeconserved transmembrane transport protein, MmpL5_35e-97356
NC_010612:835648:8391118391118419872877Mycobacterium marinum M, complete genomeconserved transmembrane transport protein MmpL16e-95349
NC_019950:481881:4866934866934895692877Mycobacterium canettii CIPT 140060008 complete genomePutative transmembrane transport protein MmpL12e-93344
NC_015848:483500:4876444876444905202877Mycobacterium canettii CIPT 140010059, complete genomeputative transmembrane transport protein MMPL12e-93344
NC_010397:4387500:4387612438761243905152904Mycobacterium abscessus chromosome Chromosome, complete sequencePutative membrane protein, MmpL family2e-93344
NC_009525:477093:4816654816654845412877Mycobacterium tuberculosis H37Ra, complete genometransmembrane transport protein MmpL15e-93343
NC_009565:479500:4835254835254864012877Mycobacterium tuberculosis F11, complete genometransmembrane transport protein mmpL15e-93343
NC_000962:475816:4803554803554832312877Mycobacterium tuberculosis H37Rv, complete genomePROBABLE CONSERVED TRANSMEMBRANE TRANSPORT PROTEIN MMPL15e-93343
NC_002755:472872:4804464804464833222877Mycobacterium tuberculosis CDC1551, complete genomemembrane protein, MmpL family5e-93343
NC_012943:476500:4806144806144834902877Mycobacterium tuberculosis KZN 1435 chromosome, complete genometransmembrane transporter mmpL15e-93343
NC_016768:476500:4806144806144834902877Mycobacterium tuberculosis KZN 4207 chromosome, complete genometransmembrane transporter mmpL15e-93343
NC_002944:1881405:1899239189923919021392901Mycobacterium avium subsp. paratuberculosis K-10, complete genomeMmpL52e-92341
NC_010397:4150596:4175704417570441786672964Mycobacterium abscessus chromosome Chromosome, complete sequencePutative membrane protein, MmpL3e-92340
NC_017904:2379387:2419426241942624223232898Mycobacterium sp. MOTT36Y chromosome, complete genomeMmpL4 protein7e-91335
NC_016948:3381848:3393669339366933965632895Mycobacterium intracellulare MOTT-64 chromosome, complete genomemmp14A protein1e-89332
NC_002944:1285436:1304793130479313076842892Mycobacterium avium subsp. paratuberculosis K-10, complete genomeMmpL4_37e-87322
NC_016948:1796989:1809658180965818124682811Mycobacterium intracellulare MOTT-64 chromosome, complete genomemmpL4_62e-82307
NC_016947:3309898:3325257332525733276262370Mycobacterium intracellulare MOTT-02 chromosome, complete genomemmpL4_24e-71270
NC_016804:2560000:2571155257115525736352481Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative transmembrane transport protein4e-58227
NC_012207:2573562:2584562258456225870422481Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative transmembrane transport protein4e-58227
NC_016947:3309898:3321728332172833246852958Mycobacterium intracellulare MOTT-02 chromosome, complete genomemmp14A protein2e-55218
NC_010612:3969244:3976045397604539789542910Mycobacterium marinum M, complete genomeconserved transmembrane transport protein - MmpL family1e-53212
NC_002944:4163490:4186438418643841893772940Mycobacterium avium subsp. paratuberculosis K-10, complete genomeMmpL4_52e-53211
NC_012207:477500:4826034826034843781776Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative transmembrane transport protein5e-53210
NC_002945:476835:4824744824744842491776Mycobacterium bovis AF2122/97, complete genometransmembrane transport protein MmpL1A5e-53210
NC_008769:507000:5122705122705140451776Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative transmembrane transport protein mmpL1a5e-53210
NC_016804:477500:4826044826044843791776Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative transmembrane transport protein5e-53210
NC_010612:3969244:3979902397990239828112910Mycobacterium marinum M, complete genomeconserved transmembrane transport protein - MmpL family6e-53209
NC_016947:70210:8074780747836322886Mycobacterium intracellulare MOTT-02 chromosome, complete genomeMmpL family protein6e-53209
NC_017026:476500:4813984813984835362139Mycobacterium tuberculosis RGTB327 chromosome, complete genometransporter2e-52208
NC_017904:3415700:3427590342759034304152826Mycobacterium sp. MOTT36Y chromosome, complete genomemmp14A protein6e-49196
NC_017904:2641270:2641270264127026441732904Mycobacterium sp. MOTT36Y chromosome, complete genomemmpL53e-46187
NC_014168:2575799:2583216258321625860532838Segniliparus rotundus DSM 44985 chromosome, complete genomeMMPL domain-containing protein4e-46187
NC_008769:507000:5111705111705122731104Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative transmembrane transport protein mmpL1b1e-38162
NC_012207:477500:4815034815034826061104Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative transmembrane transport protein1e-38162
NC_002945:476835:4813744813744824771104Mycobacterium bovis AF2122/97, complete genometransmembrane transport protein MmpL1B1e-38162
NC_016804:477500:4815044815044826071104Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative transmembrane transport protein1e-38162
NC_005957:2756000:2756118275611827592433126Bacillus thuringiensis serovar konkukian str. 97-27, completemembrane protein, MmpL family4e-37157
NC_006274:2779380:2780666278066627837913126Bacillus cereus E33L, complete genomeconserved hypothetical protein; two MmpL domains1e-36155
NC_006322:567987:5679875679875711063120Bacillus licheniformis ATCC 14580, complete genomeYdgH3e-36154
NC_006270:568171:5681715681715712903120Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-36154
NC_011772:2860000:2862262286226228653783117Bacillus cereus G9842, complete genomemembrane protein, MmpL family1e-35152
NC_014335:2718000:2719357271935727224733117Bacillus cereus biovar anthracis str. CI chromosome, completemembrane protein2e-35152
NC_011969:2706000:2707523270752327106393117Bacillus cereus Q1 chromosome, complete genomehypothetical protein3e-35151
NC_003909:2798622:2798622279862228017383117Bacillus cereus ATCC 10987, complete genomemembrane protein, MmpL family, putative5e-35150
NC_008600:2792584:2792584279258427957093126Bacillus thuringiensis str. Al Hakam, complete genomemembrane protein, MmpL family1e-34149
NC_016779:2693790:2693790269379026969063117Bacillus cereus F837/76 chromosome, complete genomemembrane protein, MmpL family4e-34147
NC_011773:2782465:2782465278246527851312667Bacillus cereus AH820 chromosome, complete genomehypothetical protein6e-34146
NC_017208:2942554:2944492294449229476083117Bacillus thuringiensis serovar chinensis CT-43 chromosome, completePhage infection protein2e-33145
NC_014393:4352216:4375707437570743788533147Clostridium cellulovorans 743B chromosome, complete genomeMmpL domain-containing protein1e-32142
NC_015172:1195782:1199795119979512028783084Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeMmpL domain-containing protein5e-32140
NC_013510:991827:1009826100982610119672142Thermomonospora curvata DSM 43183, complete genomeMMPL domain protein7e-27123
NC_015602:1339067:1360744136074413641153372Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeRND superfamily resistance-nodulation-cell division:proton (H+) antiporter2e-25118
NC_020387:745353:7458437458437487672925Dehalococcoides mccartyi BTF08, complete genomeputative membrane protein, MMPL family4e-24114
NC_002936:797110:7992957992958022402946Dehalococcoides ethenogenes 195, complete genomemembrane protein, MmpL family9e-24113
NC_017026:476500:480659480659481357699Mycobacterium tuberculosis RGTB327 chromosome, complete genomeputative transmembrane transport protein MMPL19e-24113
NC_016804:2560000:257364825736482574043396Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative transmembrane transport protein5e-23110
NC_012207:2573562:258705525870552587450396Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative transmembrane transport protein5e-23110
NC_013093:5922777:5934962593496259370102049Actinosynnema mirum DSM 43827, complete genomeMMPL domain protein5e-23110
NC_016947:3309898:332471033247103325273564Mycobacterium intracellulare MOTT-02 chromosome, complete genomemmpL4_28e-23110
NC_009380:3903392:3922739392273939248832145Salinispora tropica CNB-440 chromosome, complete genomeMMPL domain-containing protein9e-23109
NC_013521:1713416:1725755172575517280822328Sanguibacter keddieii DSM 10542, complete genomepredicted RND superfamily drug exporter2e-22108
NC_009342:795500:8170388170388192302193Corynebacterium glutamicum R chromosome, complete genomehypothetical protein6e-22107
NC_018528:1681060:1703587170358717072913705Lactobacillus helveticus R0052 chromosome, complete genomehypothetical protein4e-22107
NC_003888:6470909:6470909647090964734522544Streptomyces coelicolor A3(2), complete genomeprobable export protein4e-22107
NC_006958:628035:6375476375476397392193Corynebacterium glutamicum ATCC 13032, complete genomedrug exporter, RND superfamily7e-22106
NC_003450:627500:6360866360866382242139Corynebacterium glutamicum ATCC 13032, complete genomeRND superfamily drug exporter9e-22106
NC_015949:1767552:1789109178910917921893081Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeMMPL domain-containing protein4e-21104
NC_014550:2835696:2850986285098628531272142Arthrobacter arilaitensis Re117, complete genomeputative drug exporter of the RND superfamily1e-20102
NC_015634:2991669:3007351300735130095552205Bacillus coagulans 2-6 chromosome, complete genomeMMPL domain-containing protein2e-20101
NC_019892:8124070:8137293813729381397132421Singulisphaera acidiphila DSM 18658 chromosome, complete genomeRND superfamily drug exporter3e-1998.2
NC_003888:7866148:7866148786614878682982151Streptomyces coelicolor A3(2), complete genomeintegral membrane protein7e-1893.6
NC_003106:1899691:1918971191897119214842514Sulfolobus tokodaii str. 7, complete genomehypothetical antibiotic transport-associated protein7e-1893.6
NC_009464:2015035:2015035201503520186013567Uncultured methanogenic archaeon RC-I, complete genomepredicted drug exporter (acriflavin resistance protein family)8e-1790.1
NC_013947:1570000:1591872159187215939862115Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeMMPL domain-containing protein2e-1585.5
NC_015949:1767552:1772259177225917733231065Caldicellulosiruptor lactoaceticus 6A chromosome, complete genome1e-1482.8
NC_011896:173197:1892801892801919882709Mycobacterium leprae Br4923, complete genomehypothetical protein4e-1377.8
NC_002677:173170:1892531892531919612709Mycobacterium leprae TN, complete genomehypothetical protein4e-1377.8
NC_009921:8717659:8737976873797687401472172Frankia sp. EAN1pec, complete genomeMmpL domain protein3e-1275.1
NC_007777:3824291:3828393382839338309032511Frankia sp. CcI3, complete genomeMMPL6e-1273.9
NC_005877:665092:6650926650926677672676Picrophilus torridus DSM 9790, complete genometransporter involved in lipid transport5e-1273.9
NC_015957:6859259:6871667687166768738892223Streptomyces violaceusniger Tu 4113 chromosome, complete genomeMMPL domain-containing protein1e-1173.2
NC_015953:4045500:4045584404558440478092226Streptomyces sp. SirexAA-E chromosome, complete genomeMMPL domain-containing protein4e-1171.2
NC_009953:1581088:1600205160020516024902286Salinispora arenicola CNS-205 chromosome, complete genomeMMPL domain-containing protein9e-1170.1
NC_009921:4399000:4413784441378444161652382Frankia sp. EAN1pec, complete genomeMMPL domain protein8e-1170.1
NC_013929:6526745:6545143654514365473952253Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-1069.3
NC_013929:8474195:8485235848523584875052271Streptomyces scabiei 87.22 chromosome, complete genometransporter1e-1069.3
NC_012659:2715651:2717477271747727199002424Bacillus anthracis str. A0248, complete genome2e-1068.9
NC_012581:1505276:1518690151869015211132424Bacillus anthracis str. CDC 684 chromosome, complete genomemembrane protein, MmpL family2e-1068.9
NC_014643:892138:9141449141449153341191Rothia dentocariosa ATCC 17931 chromosome, complete genomeMMPL family integral membrane protein2e-1068.6
NC_005945:2716000:2717912271791227203442433Bacillus anthracis str. Sterne, complete genomehypothetical protein2e-1068.6
NC_015656:2484749:2513235251323525154842250Frankia symbiont of Datisca glomerata chromosome, complete genomeMMPL domain-containing protein4e-1068.2
NC_019950:3306419:3308199330819933109162718Mycobacterium canettii CIPT 140060008 complete genomePutative membrane transport protein MmpL75e-1067.8
NC_008711:3701635:3708060370806037104022343Arthrobacter aurescens TC1, complete genomeputative integral membrane protein, MMPL family4e-1067.8
NC_015848:3343731:3343731334373133464932763Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein5e-1067.4
NC_010572:188500:2111482111482134182271Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transmembrane transport protein5e-1067.4
NC_009921:3854969:3869841386984138723392499Frankia sp. EAN1pec, complete genomeMMPL domain protein6e-1067
NC_003155:6444500:6464399646439964667172319Streptomyces avermitilis MA-4680, complete genomehypothetical protein7e-1067
NC_017955:2494640:2515024251502425171832160Modestobacter marinus, complete genometransmembrane multidrug efflux transporter8e-1066.6
NC_008699:2294361:2324513232451323268672355Nocardioides sp. JS614, complete genomeMMPL domain protein8e-1066.6
NC_009380:4184695:4203090420309042052972208Salinispora tropica CNB-440 chromosome, complete genomeMMPL domain-containing protein2e-0965.9
NC_013947:5431741:5448200544820054504222223Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeMMPL domain-containing protein2e-0965.5
NC_013510:4319296:4320175432017543223282154Thermomonospora curvata DSM 43183, complete genomeMMPL domain protein9e-0963.5
NC_013510:747042:7532997532997556892391Thermomonospora curvata DSM 43183, complete genomedrug exporter of the RND superfamily-like protein1e-0863.2
NC_007181:1766910:1782228178222817844742247Sulfolobus acidocaldarius DSM 639, complete genomeconserved Prokaryal membrane protein2e-0862.4
NC_013174:23421:3049330493315511059Jonesia denitrificans DSM 20603, complete genomeMMPL domain protein4e-0861.2
NC_003888:7866148:7877335787733578795812247Streptomyces coelicolor A3(2), complete genomeintegral membrane protein4e-0861.2
NC_016582:11734963:1175119811751198117535522355Streptomyces bingchenggensis BCW-1 chromosome, complete genomeMMPL domain-containing protein5e-0860.8
NC_016782:2199000:2200732220073222029722241Corynebacterium diphtheriae 241 chromosome, complete genomeputative drug exporter of the RND superfamily9e-0860.1
NC_016786:2199500:2201331220133122035712241Corynebacterium diphtheriae HC01 chromosome, complete genomeputative drug exporter of the RND superfamily9e-0860.1
NC_016801:2271779:2275485227548522777252241Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative drug exporter of the RND superfamily9e-0860.1
NC_016790:2166000:2167433216743321696732241Corynebacterium diphtheriae VA01 chromosome, complete genomeputative drug exporter of the RND superfamily9e-0860.1
NC_016787:2245000:2246440224644022486802241Corynebacterium diphtheriae HC03 chromosome, complete genomeputative drug exporter of the RND superfamily9e-0860.1
NC_016799:2303500:2304969230496923072092241Corynebacterium diphtheriae 31A chromosome, complete genomeputative drug exporter of the RND superfamily9e-0860.1
NC_016800:2239626:2243332224333222455722241Corynebacterium diphtheriae BH8 chromosome, complete genomeputative drug exporter of the RND superfamily8e-0860.1
NC_016788:2265792:2270257227025722724972241Corynebacterium diphtheriae HC04 chromosome, complete genomeputative drug exporter of the RND superfamily8e-0860.1
NC_016783:2212341:2216047221604722182872241Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative drug exporter of the RND superfamily8e-0860.1
NC_016785:2215732:2219438221943822216782241Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeputative drug exporter of the RND superfamily8e-0860.1
NC_007164:2261644:2270199227019922723732175Corynebacterium jeikeium K411, complete genomeputative drug exporter of the RND superfamily2e-0759.3
NC_016789:2281180:2284886228488622871262241Corynebacterium diphtheriae PW8 chromosome, complete genomeputative drug exporter of the RND superfamily2e-0758.5
NC_010545:2229125:2251454225145422538592406Corynebacterium urealyticum DSM 7109, complete genomeputative drug exporter of the RND superfamily4e-0757.8
NC_009664:4423829:4463248446324844656712424Kineococcus radiotolerans SRS30216, complete genomeputative membrane transport protein6e-0757.4
NC_015660:3518931:3541386354138635436112226Geobacillus thermoglucosidasius C56-YS93 chromosome, completeMMPL domain-containing protein1e-0656.2
NC_020133:4889034:4905108490510849071952088Mycobacterium liflandii 128FXT, complete genometransmembrane transport protein MmpL133e-0655.1
NC_018876:1121268:1145755114575511480042250Methanolobus psychrophilus R15 chromosome, complete genomehydrophobe/amphiphile efflux-3 (HAE3) family transporter3e-0655.1
NC_013521:2193203:2198105219810522003032199Sanguibacter keddieii DSM 10542, complete genomepredicted RND superfamily drug exporter4e-0654.3
NC_013174:501326:5190135190135217422730Jonesia denitrificans DSM 20603, complete genomeMMPL domain protein5e-0654.3
NC_016790:134951:1542801542801566162337Corynebacterium diphtheriae VA01 chromosome, complete genomeputative drug exporter of the RND superfamily7e-0653.5
NC_016884:587789:6071966071966093402145Sulfobacillus acidophilus DSM 10332 chromosome, complete genomehypothetical protein8e-0653.5
NC_015757:1973925:1981244198124419833882145Sulfobacillus acidophilus TPY chromosome, complete genomeMMPL domain protein8e-0653.5
NC_016801:170876:1927411927411950772337Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative drug exporter of the RND superfamily8e-0653.5