Pre_GI Gene

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Host: NC_010612 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010612:3969244 Mycobacterium marinum M, complete genome

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
396924439710281785short-chain dehydrogenase EphDQuickGO ontologyBLASTP
397125739730231767pyruvate dehydrogenase E2 component SucBQuickGO ontologyBLASTP
39730283973939912hypothetical proteinBLASTP
39740863974850765integral membrane protein ABC transporterQuickGO ontologyBLASTP
39749403975905966ATP-binding protein ABC transporterQuickGO ontologyBLASTP
397604539789542910conserved transmembrane transport protein - MmpL familyQuickGO ontologyBLASTP
39793893979619231conserved hypothetical MbtH-like proteinQuickGO ontologyBLASTP
397990239828112910conserved transmembrane transport protein - MmpL familyQuickGO ontologyBLASTP
39828083983197390conserved transmembrane proteinQuickGO ontologyBLASTP
3984467401404329577non-ribosomal peptide synthetaseQuickGO ontologyBLASTP