Pre_GI Gene

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Host: NC_009380 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009380:4184695 Salinispora tropica CNB-440 chromosome, complete genome

Host Lineage: Salinispora tropica; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from coarse beach sand off the Bahamas. An obligate marine actinomycete. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. This species produces the chemicals salinosporamide A and B which may be useful for cancer treatment.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
418469541861071413diaminopimelate decarboxylaseQuickGO ontologyBLASTP
418627341879371665arginyl-tRNA synthetaseQuickGO ontologyBLASTP
41880384188859822hypothetical proteinBLASTP
41888734189538666hypothetical proteinBLASTP
41898764190490615hypothetical proteinBLASTP
4190586419066075tRNA-ArgQuickGO ontology
41908494191037189hypothetical proteinBLASTP
41910544191791738hypothetical proteinBLASTP
41922014192542342hypothetical proteinBLASTP
419363541996586024YD repeat-containing proteinQuickGO ontologyBLASTP
41996844199995312hypothetical protein
420036342014991137polysaccharide deacetylaseQuickGO ontologyBLASTP
420132142023401020DNA primase small subunitQuickGO ontologyBLASTP
42025104203058549regulatory protein TetRQuickGO ontologyBLASTP
420309042052972208MMPL domain-containing proteinQuickGO ontologyBLASTP
420540742066631257erythromycin esteraseQuickGO ontologyBLASTP
42067354206926192hypothetical protein
420693242084371506hypothetical proteinBLASTP