Pre_GI Gene

Some Help

Host: NC_020387 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_020387:745353 Dehalococcoides mccartyi BTF08, complete genome

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface.There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
745353745838486transcriptional regulator MarR familyQuickGO ontologyBLASTP
7458437487672925putative membrane protein MMPL familyQuickGO ontologyBLASTP
748813749457645putative transcriptional repressor LexAQuickGO ontologyBLASTP
749648749809162hypothetical protein
749956750483528hypothetical protein
750467751069603hypothetical proteinBLASTP
751222751500279transposase orfA IS3IS911 familyQuickGO ontologyBLASTP
751521752336816transposase orfBQuickGO ontologyBLASTP
752820753260441LuxR domain-containing proteinQuickGO ontologyBLASTP
7532537542721020hypothetical proteinBLASTP
754280754501222DNA binding protein excisionase familyQuickGO ontologyBLASTP
75570975578173tRNA-LysQuickGO ontology
755887756222336transcriptional regulator ArsR familyQuickGO ontologyBLASTP
7565867578601275arsenical resistance efflux pumpQuickGO ontologyBLASTP
7578627592471386putative permease MFS familyQuickGO ontologyBLASTP
7593977605061110aminopeptidaseQuickGO ontologyBLASTP
760543761214672phosphoribosyl transferase domain-containing proteinQuickGO ontologyBLASTP
761371761877507rubrerythrinQuickGO ontology
761939762634696hypothetical protein
762653763459807hypothetical protein
763443764351909hypothetical proteinBLASTP