Pre_GI: BLASTP Hits

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Query: NC_007348:2519447:2542365 Ralstonia eutropha JMP134 chromosome 2, complete sequence

Start: 2542365, End: 2542763, Length: 399

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008313:886248:911312911312911713402Ralstonia eutropha H16 chromosome 1, complete sequenceputative translation initiation inhibitor, yjgF family7e-39159
NC_020829:4390417:440964644096464410062417Pseudomonas denitrificans ATCC 13867, complete genomeendoribonuclease L-PSP3e-36150
NC_010512:110932:130333130333130731399Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceEndoribonuclease L-PSP2e-1787.4
NC_009668:1591290:159437815943781594770393Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceendoribonuclease L-PSP4e-1786.7
NC_011149:1578451:158904115890411589430390Salmonella enterica subsp. enterica serovar Agona str. SL483,endoribonuclease L-PSP family protein4e-1683.6
NC_003197:1611302:162600516260051626394390Salmonella typhimurium LT2, complete genomeputative translation initiation inhibitor4e-1683.6
NC_016810:1576636:158285815828581583247390Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-1683.6
NC_016856:1621279:163598216359821636371390Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative translation initiation inhibitor4e-1683.6
NC_016860:1614280:162369516236951624084390Salmonella enterica subsp. enterica serovar Typhimurium strendoribonuclease L-PSP family protein4e-1683.6
NC_016863:1575488:158417315841731584562390Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative translation initiation inhibitor4e-1683.6
NC_017046:1574057:158274215827421583158417Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein4e-1683.6
NC_016857:1576636:158285815828581583319462Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative translation initiation inhibitor4e-1683.2
NC_003296:1665569:166827616682761668713438Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein1e-1581.6
NC_003296:1696958:169846616984661698903438Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSMEMBRANE PROTEIN1e-1581.6
NC_015761:1488807:150350915035091503898390Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-1581.3
NC_009436:3807420:382036738203673820762396Enterobacter sp. 638, complete genomeendoribonuclease L-PSP3e-1580.9
NC_007613:4217557:424919142491914249586396Shigella boydii Sb227, complete genomehypothetical protein3e-1580.5
NC_010645:1341475:136079613607961361197402Bordetella avium 197N, complete genomeendoribonuclease3e-1580.5
AC_000091:4472000:447749444774944477889396Escherichia coli W3110 DNA, complete genomepredicted mRNA endoribonuclease4e-1580.1
NC_000913:4462782:447083744708374471232396Escherichia coli K12, complete genomepredicted mRNA endoribonuclease4e-1580.1
NC_010473:4564590:457264545726454573040396Escherichia coli str. K-12 substr. DH10B, complete genomepredicted mRNA endoribonuclease4e-1580.1
NC_007974:138176:150604150604151227624Ralstonia metallidurans CH34 chromosome 2, complete sequenceEndoribonuclease L-PSP4e-1580.1
NC_010658:4494103:450647745064774506872396Shigella boydii CDC 3083-94, complete genomeendoribonuclease L-PSP family protein5e-1579.7
NC_010498:4821519:482803448280344828429396Escherichia coli SMS-3-5, complete genomeendoribonuclease L-PSP family protein6e-1579.3
NC_012967:4449576:445609144560914456486396Escherichia coli B str. REL606 chromosome, complete genomeputative mRNA endoribonuclease6e-1579.3
NC_012947:3947238:395762239576223958017396Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeendoribonuclease L-PSP6e-1579.3
NC_015663:3742738:375266437526643753065402Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-1477.4
NC_020302:1074120:107518810751881075625438Corynebacterium halotolerans YIM 70093 = DSM 44683, completetranslation initiation inhibitor3e-1477.4
NC_011742:4795733:480224848022484802643396Escherichia coli S88 chromosome, complete genomemRNA endoribonuclease3e-1477
NC_020181:1653261:166517216651721665573402Enterobacter aerogenes EA1509E, complete genomeprobable translation initiation inhibitor protein1e-1375.5
NC_014210:5309121:531140453114045311829426Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Endoribonuclease L-PSP2e-1168.2
NC_011283:1811000:188610318861031886492390Klebsiella pneumoniae 342 chromosome, complete genomeendoribonuclease L-PSP family protein9e-1165.5
NC_017515:1601954:160261416026141603003390Neisseria meningitidis M04-240196 chromosome, complete genomeendoribonuclease L-PSP2e-1064.7
NC_003112:673772:689773689773690162390Neisseria meningitidis MC58, complete genomeputative ribonuclease1e-1064.7
NC_010120:609323:631641631641632030390Neisseria meningitidis 053442, complete genomeribonuclease, putative1e-1064.7
NC_008767:613394:634500634500634889390Neisseria meningitidis FAM18, complete genomehypothetical protein1e-1064.7
NC_013016:571255:589884589884590273390Neisseria meningitidis alpha14 chromosome, complete genometranslation initiation inhibitor1e-1064.7
NC_017501:1680075:168249516824951682884390Neisseria meningitidis 8013, complete genomeputative endoribonuclease1e-1064.7
NC_017505:670919:691717691717692106390Neisseria meningitidis alpha710 chromosome, complete genomehypothetical protein1e-1064.7
NC_017513:618500:642487642487642876390Neisseria meningitidis G2136 chromosome, complete genomeendoribonuclease L-PSP1e-1064.7
NC_017514:1568591:156925115692511569640390Neisseria meningitidis M01-240149 chromosome, complete genomeendoribonuclease L-PSP1e-1064.7
NC_017516:1613762:161442216144221614811390Neisseria meningitidis H44/76 chromosome, complete genomeendoribonuclease L-PSP1e-1064.7
NC_017518:743955:765382765382765771390Neisseria meningitidis NZ-05/33 chromosome, complete genomeendoribonuclease L-PSP1e-1064.7
NC_007412:110698:117280117280117744465Anabaena variabilis ATCC 29413 plasmid C, complete sequenceEndoribonuclease L-PSP2e-1064.3
NC_015277:5211779:523113752311375231598462Sphingobacterium sp. 21 chromosome, complete genomeEndoribonuclease L-PSP3e-1063.9
NC_014931:2511423:252562525256252526026402Variovorax paradoxus EPS chromosome, complete genomeEndoribonuclease L-PSP4e-1063.5
NC_011094:1584038:159345315934531593779327Salmonella enterica subsp. enterica serovar Schwarzengrund strendoribonuclease L-PSP4e-1063.5
NC_011297:1167615:117385711738571174234378Dictyoglomus thermophilum H-6-12, complete genomeendoribonuclease L-PSP4e-1063.5
NC_016885:809000:814549814549814929381Pyrobaculum oguniense TE7 chromosome, complete genomeendoribonuclease L-PSP4e-1063.5
NC_021182:401129:416427416427416807381Clostridium pasteurianum BC1, complete genomeendoribonuclease L-PSP, putative7e-1062.4
NC_011661:1332309:135425513542551354632378Dictyoglomus turgidum DSM 6724, complete genomeendoribonuclease L-PSP1e-0962
NC_016612:5208936:522213152221315222526396Klebsiella oxytoca KCTC 1686 chromosome, complete genomeendoribonuclease L-PSP family protein1e-0961.6
NC_015589:7678:182061820618589384Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeendoribonuclease L-PSP1e-0961.6
NC_009614:3714770:372855137285513728928378Bacteroides vulgatus ATCC 8482 chromosome, complete genomeendoribonuclease L-PSP2e-0961.2
NC_003210:870587:882328882328882705378Listeria monocytogenes EGD-e, complete genomehypothetical protein2e-0961.2
NC_013766:906550:918309918309918686378Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein2e-0961.2
NC_015690:3941113:397856539785653978864300Paenibacillus mucilaginosus KNP414 chromosome, complete genomeendoribonuclease L-PSP2e-0960.8
NC_016935:1365463:139792113979211398301381Paenibacillus mucilaginosus 3016 chromosome, complete genomeendoribonuclease L-PSP3e-0960.8
NC_010172:1199725:120944312094431209829387Methylobacterium extorquens PA1, complete genomeEndoribonuclease L-PSP3e-0960.5
NC_010170:2374852:237607623760762376462387Bordetella petrii, complete genomeputative translational inhibitor4e-0960.1
NC_007948:360199:369335369335369733399Polaromonas sp. JS666, complete genomeEndoribonuclease L-PSP5e-0959.7
NC_011757:1246000:127379612737961274182387Methylobacterium chloromethanicum CM4, complete genomeEndoribonuclease L-PSP8e-0959.3
NC_003911:3864852:388910438891043889520417Silicibacter pomeroyi DSS-3, complete genomeendoribonuclease L-PSP family protein1e-0858.9
NC_011740:2859933:288112928811292881563435Escherichia fergusonii ATCC 35469, complete genomeputative endoribonuclease2e-0858.2
NC_008701:391216:401455401455401829375Pyrobaculum islandicum DSM 4184, complete genomeputative endoribonuclease L-PSP2e-0858.2
NC_017517:703811:719695719695720084390Neisseria meningitidis M01-240355 chromosome, complete genomeendoribonuclease L-PSP2e-0858.2
NC_014758:579741:586370586370586747378Calditerrivibrio nitroreducens DSM 19672 chromosome, completeendoribonuclease l-psp2e-0857.8
NC_014640:2693060:270855427085542708949396Achromobacter xylosoxidans A8 chromosome, complete genomeendoribonuclease L-PSP family protein3e-0857
NC_008698:560529:563553563553563933381Thermofilum pendens Hrk 5, complete genomeputative endoribonuclease L-PSP4e-0856.6
NC_016642:1234500:123607312360731236456384Pseudovibrio sp. FO-BEG1 chromosome, complete genomezinc carboxypeptidase-like protein5e-0856.6
NC_007912:4661141:468365446836544684037384Saccharophagus degradans 2-40, complete genomePeptidase S1C, Do6e-0856.2
NC_013385:90331:993919939199813423Ammonifex degensii KC4, complete genomeendoribonuclease L-PSP8e-0855.8
NC_010623:1961685:197300619730061973410405Burkholderia phymatum STM815 chromosome 2, complete sequenceEndoribonuclease L-PSP7e-0855.8
NC_018750:6869675:688702968870296887505477Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein7e-0855.8
NC_010645:558974:577112577112577549438Bordetella avium 197N, complete genome2-aminomuconate deaminase7e-0855.8
NC_011283:1811000:187396318739631874388426Klebsiella pneumoniae 342 chromosome, complete genomeendoribonuclease L-PSP family protein1e-0755.1
NC_015690:2553837:256098725609872561379393Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein1e-0755.1
NC_016935:3103430:311051431105143110906393Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein1e-0755.1
NC_013515:1125739:114379311437931144158366Streptobacillus moniliformis DSM 12112, complete genomeendoribonuclease L-PSP1e-0755.1
NC_010645:1341475:136041313604131360799387Bordetella avium 197N, complete genomeendoribonuclease2e-0754.7
NC_016025:807226:829399829399829797399Candidatus Chloracidobacterium thermophilum B chromosome chromosomeendoribonuclease L-PSP2e-0754.3
NC_014532:3967463:398728439872843987673390Halomonas elongata DSM 2581, complete genomeK07567 TdcF protein2e-0754.3
NC_010512:1196616:121117012111701211607438Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceEndoribonuclease L-PSP2e-0754.3
NC_010557:1030319:103315510331551033592438Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceEndoribonuclease L-PSP2e-0754.3
NC_014632:113420:126595126595126978384Ilyobacter polytropus DSM 2926 chromosome, complete genomeendoribonuclease L-PSP2e-0754.3
NC_020063:4170464:418221241822124182598387Enterobacteriaceae bacterium strain FGI 57, complete genomeendoribonuclease L-PSP, putative2e-0754.3
NC_012669:96966:100822100822101265444Beutenbergia cavernae DSM 12333, complete genomeEndoribonuclease L-PSP2e-0754.3
NC_002927:4392768:439466943946694395085417Bordetella bronchiseptica RB50, complete genomehypothetical protein3e-0753.9
NC_015496:2155816:216533021653302165776447Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeEndoribonuclease L-PSP3e-0753.9
NC_007576:435713:457772457772458158387Lactobacillus sakei subsp. sakei 23K, complete genomePutative single-stranded mRNA endoribonuclease3e-0753.9
NC_020291:5409587:541865554186555419059405Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeendoribonuclease L-PSP5e-0753.1
NC_012982:2415237:243796724379672438374408Hirschia baltica ATCC 49814, complete genomeEndoribonuclease L-PSP6e-0753.1
NC_007963:2644930:267840626784062678843438Chromohalobacter salexigens DSM 3043, complete genomeEndoribonuclease L-PSP7e-0752.8
NC_016860:4024000:404045640404564040836381Salmonella enterica subsp. enterica serovar Typhimurium strtranslation initiation inhibitor7e-0752.8
NC_008148:1859888:188143618814361881861426Rubrobacter xylanophilus DSM 9941, complete genomeEndoribonuclease L-PSP6e-0752.8
NC_013941:3884725:388910538891053889557453Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeTdcF protein9e-0752.4
NC_017328:3289853:329128932912893291741453Shigella flexneri 2002017 chromosome, complete genomehypothetical protein9e-0752.4
NC_007613:2981829:298182929818292982281453Shigella boydii Sb227, complete genomehypothetical protein9e-0752.4
NC_008258:3224721:322615732261573226609453Shigella flexneri 5 str. 8401, complete genomehypothetical protein9e-0752.4
CU928160:3344746:334618233461823346571390Escherichia coli IAI1 chromosome, complete genomeL-PSP (mRNA) endoribonuclease1e-0652
NC_011750:3768692:377307237730723773461390Escherichia coli IAI39 chromosome, complete genomehypothetical protein1e-0652
NC_011748:3608917:361329736132973613686390Escherichia coli 55989, complete genomehypothetical protein1e-0652
NC_010658:3014371:302702430270243027413390Shigella boydii CDC 3083-94, complete genomeputative endoribonuclease L-PSP1e-0652
NC_009800:3307123:330855933085593308948390Escherichia coli HS, complete genomeputative endoribonuclease L-PSP1e-0652
NC_004337:3249791:325122732512273251616390Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-0652
CP002516:613462:628259628259628648390Escherichia coli KO11, complete genomeendoribonuclease L-PSP1e-0652
CP002185:3475991:347742534774253477814390Escherichia coli W, complete genomepredicted L-PSP (mRNA) endoribonuclease1e-0652
CU928145:3608917:361329736132973613686390Escherichia coli 55989 chromosome, complete genomeL-PSP (mRNA) endoribonuclease1e-0652
NC_015873:1411718:141171814117181412104387Megasphaera elsdenii DSM 20460, complete genomeputative endoribonuclease L-PSP1e-0652
NC_008687:229941:230709230709231107399Paracoccus denitrificans PD1222 chromosome 2, complete sequenceEndoribonuclease L-PSP1e-0652
NC_015873:380485:409686409686410054369Megasphaera elsdenii DSM 20460, complete genomeputative endoribonuclease L-PSP1e-0652
NC_016609:7608723:763228376322837632669387Niastella koreensis GR20-10 chromosome, complete genomeendoribonuclease L-PSP1e-0652
AC_000091:3258377:325837732583773258766390Escherichia coli W3110 DNA, complete genomepredicted L-PSP (mRNA) endoribonuclease1e-0652
NC_000913:3256307:325774332577433258132390Escherichia coli K12, complete genomepredicted L-PSP (mRNA) endoribonuclease1e-0652
NC_008313:1956500:196830319683031968788486Ralstonia eutropha H16 chromosome 1, complete sequenceputative translation initiation inhibitor,yjgFfamily1e-0652
NC_011751:3710786:371516737151673715556390Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-0652
NC_016902:613462:628259628259628648390Escherichia coli KO11FL chromosome, complete genomeendoribonuclease L-PSP1e-0652
NC_012967:3191319:319275531927553193144390Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein1e-0652
NC_012947:630757:647395647395647784390Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein1e-0652
NC_012759:3143455:314489131448913145280390Escherichia coli BW2952 chromosome, complete genomehypothetical protein1e-0652
NC_011741:3344746:334618233461823346571390Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-0652
NC_011415:3523364:352774435277443528133390Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-0652
NC_010468:613812:630450630450630839390Escherichia coli ATCC 8739, complete genomeendoribonuclease L-PSP1e-0652
NC_010473:3354052:335548833554883355877390Escherichia coli str. K-12 substr. DH10B, complete genomepredicted L-PSP (mRNA) endoribonuclease1e-0652
NC_010498:3488513:348994934899493490338390Escherichia coli SMS-3-5, complete genomeputative endoribonuclease L-PSP1e-0652
NC_002695:3994970:399935039993503999739390Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-0652
NC_004741:3240909:324234532423453242734390Shigella flexneri 2a str. 2457T, complete genomehypothetical protein1e-0652
NC_007951:3631772:363641636364163636853438Burkholderia xenovorans LB400 chromosome 1, complete sequence2-aminomuconate deaminase1e-0651.6
NC_012121:139741:149032149032149412381Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative purine regulatory protein2e-0651.6
NC_009512:2108686:213089621308962131357462Pseudomonas putida F1, complete genomeEndoribonuclease L-PSP2e-0651.2
NC_006526:1976779:200247620024762002922447Zymomonas mobilis subsp. mobilis ZM4, complete genometranslational inhibitor protein2e-0651.2
NC_003296:1665569:167318916731891673566378Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein2e-0651.2
NC_003296:1696958:170337917033791703756378Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein2e-0651.2
NC_014618:586240:610365610365610754390Enterobacter cloacae SCF1 chromosome, complete genomeendoribonuclease L-PSP2e-0651.2
NC_009342:841500:851477851477851887411Corynebacterium glutamicum R chromosome, complete genomehypothetical protein3e-0650.8
AC_000091:4472000:447520744752074475593387Escherichia coli W3110 DNA, complete genomeketoacid-binding protein4e-0650.4
NC_010473:4564590:457035845703584570744387Escherichia coli str. K-12 substr. DH10B, complete genomeketoacid-binding protein4e-0650.4
NC_000913:4462782:446855044685504468936387Escherichia coli K12, complete genomeketoacid-binding protein4e-0650.4
NC_011742:4795733:479996147999614800347387Escherichia coli S88 chromosome, complete genomeketoacid-binding protein4e-0650.4
NC_012947:3947238:395991839599183960304387Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeendoribonuclease L-PSP4e-0650.4
NC_012967:4449576:445380444538044454190387Escherichia coli B str. REL606 chromosome, complete genomeketoacid-binding protein4e-0650.4
NC_010498:4821519:482574748257474826172426Escherichia coli SMS-3-5, complete genomeputative endoribonuclease L-PSP3e-0650.4
NC_007613:4217557:425144742514474251872426Shigella boydii Sb227, complete genomehypothetical protein4e-0650.1
NC_008314:477722:515235515235515708474Ralstonia eutropha H16 chromosome 2, complete sequenceEndoribonuclease L-PSP4e-0650.1
NC_010658:4494103:450877145087714509157387Shigella boydii CDC 3083-94, complete genomeputative endoribonuclease L-PSP5e-0650.1
NC_014532:752807:754783754783755208426Halomonas elongata DSM 2581, complete genomeendoribonuclease L-PSP1e-0548.9