Pre_GI Gene

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Host: NC_007912 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007912:4661141 Saccharophagus degradans 2-40, complete genome

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
466114146624121272Ricin B lectinQuickGO ontologyBLASTP
46626094663283675DEADDEAH box helicase-likeQuickGO ontologyBLASTP
4663497466373323750S ribosomal subunit protein L28QuickGO ontologyBLASTP
4663762466391715650S ribosomal protein L33QuickGO ontologyBLASTP
46640204664835816Pseudouridine synthase RsuQuickGO ontologyBLASTP
46648434665247405hypothetical protein
46654994666218720tRNA nucleotidyltransferaseQuickGO ontologyBLASTP
46664194667285867ATP-dependent DNA helicase RecGQuickGO ontologyBLASTP
466754146693371797hypothetical proteinBLASTP
46693464669819474hypothetical proteinBLASTP
466988846710721185hypothetical proteinBLASTP
46710744671949876hypothetical protein
46725024673188687Deoxyribonuclease VQuickGO ontologyBLASTP
467328546752581974hypothetical proteinBLASTP
467560146771211521Mannan endo-14-beta-mannosidaseQuickGO ontologyBLASTP
46775834678332750Amino acid adenylationQuickGO ontologyBLASTP
467840846798381431response regulator receiver domain protein CheY-likeQuickGO ontologyBLASTP
46799194680347429peptidyl-prolyl cis-trans isomerase FkpA FKBP-typeQuickGO ontologyBLASTP
46804714681148678Guanylate kinaseQuickGO ontologyBLASTP
46812134681485273DNA-directed RNA polymerase omega subunitQuickGO ontologyBLASTP
468150946836172109GTP diphosphokinaseQuickGO ontologyBLASTP
46836544684037384Peptidase S1C DoQuickGO ontologyBLASTP