Pre_GI Gene

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Host: NC_015761 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015761:1488807 Salmonella bongori NCTC 12419, complete genome

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14888071489535729NiFe-hydrogenase 1 b-type cytochrome subunit HyaC2QuickGO ontologyBLASTP
148950114913031803uptake hydrogenase large subunitQuickGO ontologyBLASTP
149130614924091104uptake hydrogenase small subunitQuickGO ontologyBLASTP
149284114939291089secreted hydrolaseQuickGO ontologyBLASTP
14941041494778675regulatory proteinQuickGO ontologyBLASTP
149482614958511026alcohol dehydrogenaseQuickGO ontologyBLASTP
149582614971121287membrane transport proteinQuickGO ontologyBLASTP
149728714987771491hypothetical proteinBLASTP
149891615001541239multidrug efflux proteinQuickGO ontologyBLASTP
150014415016521509oxygenaseQuickGO ontologyBLASTP
15016971502185489regulatory proteinQuickGO ontologyBLASTP
150236215034411080isomeraseQuickGO ontologyBLASTP
15035091503898390hypothetical proteinBLASTP
15044561504944489acetyltransferaseQuickGO ontologyBLASTP
15049321505210279hypothetical proteinBLASTP
150531315073882076glycogen debranching protein GlgXQuickGO ontologyBLASTP